babelmixr2: Use 'nlmixr2' to Interact with Open Source and Commercial Software

Run other estimation and simulation software via the 'nlmixr2' (Fidler et al (2019) <doi:10.1002/psp4.12445>) interface including 'PKNCA', 'NONMEM' and 'Monolix'. While not required, you can get/install the 'lixoftConnectors' package in the 'Monolix' installation, as described at the following url <https://monolixsuite.slp-software.com/r-functions/2024R1/installation-and-initialization>. When 'lixoftConnectors' is available, 'Monolix' can be run directly instead of setting up command line usage.

Version: 0.1.4
Depends: R (≥ 3.5), nlmixr2 (≥ 2.0.8)
Imports: checkmate, cli, digest, lotri, nlmixr2est (≥ 2.1.6), nonmem2rx (≥ 0.1.3), monolix2rx, methods, qs, rex, rxode2 (≥ 3.0.0)
LinkingTo: Rcpp, rxode2, RcppArmadillo, RcppEigen
Suggests: testthat, nlmixr2data, withr, lixoftConnectors, PKNCA (≥ 0.10.0), knitr, rmarkdown, spelling, PopED, units, vdiffr, dplyr
Published: 2024-09-23
DOI: 10.32614/CRAN.package.babelmixr2
Author: Matthew Fidler ORCID iD [aut, cre], Bill Denney ORCID iD [aut], Nook Fulloption [ctb] (goldfish art)
Maintainer: Matthew Fidler <matthew.fidler at gmail.com>
License: GPL (≥ 3)
URL: https://nlmixr2.github.io/babelmixr2/, https://github.com/nlmixr2/babelmixr2/
NeedsCompilation: yes
Language: en-US
Citation: babelmixr2 citation info
Materials: README NEWS
In views: MixedModels
CRAN checks: babelmixr2 results

Documentation:

Reference manual: babelmixr2.pdf
Vignettes: Creating a New Estimation Method (source, R code)
Obtain initial estimates and unit conversions with PKNCA (source, R code)

Downloads:

Package source: babelmixr2_0.1.4.tar.gz
Windows binaries: r-devel: babelmixr2_0.1.4.zip, r-release: babelmixr2_0.1.4.zip, r-oldrel: babelmixr2_0.1.2.zip
macOS binaries: r-release (arm64): babelmixr2_0.1.4.tgz, r-oldrel (arm64): babelmixr2_0.1.2.tgz, r-release (x86_64): babelmixr2_0.1.4.tgz, r-oldrel (x86_64): babelmixr2_0.1.2.tgz
Old sources: babelmixr2 archive

Linking:

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