CRAN Package Check Results for Maintainer ‘Toby Hocking <toby.hocking at r-project.org>’

Last updated on 2025-10-24 12:50:55 CEST.

Package ERROR NOTE OK
animint2 2 11
atime 13
aum 13
binsegRcpp 13
directlabels 13
FLOPART 13
inlinedocs 13
LOPART 2 11
mlr3resampling 3 10
nc 13
neuroblastoma 3 10
PeakError 2 11
PeakSegDisk 13
PeakSegDP 2 11
PeakSegJoint 13
PeakSegOptimal 13
penaltyLearning 13
plotHMM 13
slurm 13
WeightedROC 13

Package animint2

Current CRAN status: NOTE: 2, OK: 11

Version: 2025.10.17
Check: installed package size
Result: NOTE installed size is 5.9Mb sub-directories of 1Mb or more: data 3.7Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package atime

Current CRAN status: OK: 13

Package aum

Current CRAN status: OK: 13

Package binsegRcpp

Current CRAN status: OK: 13

Package directlabels

Current CRAN status: OK: 13

Package FLOPART

Current CRAN status: OK: 13

Package inlinedocs

Current CRAN status: OK: 13

Package LOPART

Current CRAN status: NOTE: 2, OK: 11

Version: 2024.6.19
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Toby Dylan Hocking <toby.hocking@r-project.org>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: person(given = c("Toby", "Dylan"), family = "Hocking", role = c("aut", "cre"), email = "toby.hocking@r-project.org") as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package mlr3resampling

Current CRAN status: ERROR: 3, OK: 10

Version: 2025.6.23
Check: tests
Result: ERROR Running 'testthat.R' [12s] Running the tests in 'tests/testthat.R' failed. Complete output: > data.table::setDTthreads(1L) > if(require(testthat))test_check("mlr3resampling") Loading required package: testthat Loading required package: mlr3resampling INFO [16:36:31.140] [bbotk] Starting to optimize 0 parameter(s) with '<TunerBatchInternal>' and '<TerminatorEvals> [n_evals=1, k=0]' INFO [16:36:31.197] [bbotk] Evaluating 1 configuration(s) INFO [16:36:31.232] [mlr3] Running benchmark with 1 resampling iterations INFO [16:36:31.392] [mlr3] Applying learner 'regr.mlp' on task 'easy' (iter 1/1) Flavor: r-devel-windows-x86_64

Version: 2025.6.23
Check: tests
Result: ERROR Running 'testthat.R' [12s] Running the tests in 'tests/testthat.R' failed. Complete output: > data.table::setDTthreads(1L) > if(require(testthat))test_check("mlr3resampling") Loading required package: testthat Loading required package: mlr3resampling INFO [11:18:23.976] [bbotk] Starting to optimize 0 parameter(s) with '<TunerBatchInternal>' and '<TerminatorEvals> [n_evals=1, k=0]' INFO [11:18:24.014] [bbotk] Evaluating 1 configuration(s) INFO [11:18:24.043] [mlr3] Running benchmark with 1 resampling iterations INFO [11:18:24.182] [mlr3] Applying learner 'regr.mlp' on task 'easy' (iter 1/1) Flavor: r-release-windows-x86_64

Version: 2025.6.23
Check: tests
Result: ERROR Running 'testthat.R' [20s] Running the tests in 'tests/testthat.R' failed. Complete output: > data.table::setDTthreads(1L) > if(require(testthat))test_check("mlr3resampling") Loading required package: testthat Loading required package: mlr3resampling INFO [00:05:13.771] [bbotk] Starting to optimize 0 parameter(s) with '<TunerBatchInternal>' and '<TerminatorEvals> [n_evals=1, k=0]' INFO [00:05:13.854] [bbotk] Evaluating 1 configuration(s) INFO [00:05:13.889] [mlr3] Running benchmark with 1 resampling iterations INFO [00:05:14.084] [mlr3] Applying learner 'regr.mlp' on task 'easy' (iter 1/1) INFO [00:05:16.250] [bbotk] Starting to optimize 0 parameter(s) with '<TunerBatchInternal>' and '<TerminatorEvals> [n_evals=1, k=0]' INFO [00:05:16.256] [bbotk] Evaluating 1 configuration(s) INFO [00:05:16.272] [mlr3] Running benchmark with 1 resampling iterations INFO [00:05:16.314] [mlr3] Applying learner 'regr.mlp' on task 'easy' (iter 1/1) [ FAIL 2 | WARN 3 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-CRAN.R:672:3'): mlr3torch history saved ──────────────────────── <std::runtime_error/C++Error/error/condition> Error in `cpp_cuda_is_available()`: Lantern is not loaded. Please use `install_torch()` to install additional dependencies. Backtrace: ▆ 1. └─mlr3resampling::proj_compute(pkg.proj.dir) at test-CRAN.R:672:3 2. └─this.learner$train(this.task, set_rows("train")) 3. └─mlr3:::.__Learner__train(...) 4. └─mlr3:::learner_train(...) 5. └─mlr3misc::encapsulate(...) 6. ├─mlr3misc::invoke(...) 7. │ └─base::eval.parent(expr, n = 1L) 8. │ └─base::eval(expr, p) 9. │ └─base::eval(expr, p) 10. └─mlr3 (local) .f(learner = `<S3: AutoTuner>`, task = `<S3: TaskRegr>`) 11. └─get_private(learner)$.train(task) 12. └─mlr3tuning:::.__AutoTuner__.train(...) 13. └─self$tuner$optimize(instance) 14. └─mlr3tuning:::.__TunerBatch__optimize(...) 15. └─bbotk::optimize_batch_default(inst, self) 16. ├─base::tryCatch(...) 17. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 18. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 19. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 20. └─get_private(optimizer)$.optimize(instance) 21. └─mlr3tuning:::.__TunerBatchInternal__.optimize(...) 22. └─inst$eval_batch(data.table()) 23. └─bbotk:::.__OptimInstanceBatch__eval_batch(...) 24. └─self$objective$eval_many(list(list())) 25. └─bbotk:::.__Objective__eval_many(...) 26. ├─mlr3misc::invoke(private$.eval_many, xss = xss, .args = self$constants$values) 27. │ └─base::eval.parent(expr, n = 1L) 28. │ └─base::eval(expr, p) 29. │ └─base::eval(expr, p) 30. └─private$.eval_many(xss = xss, resampling = `<list>`) 31. └─mlr3tuning:::.__ObjectiveTuningBatch__.eval_many(...) 32. └─mlr3::benchmark(...) 33. └─mlr3:::future_map(...) 34. └─future.apply::future_mapply(...) 35. └─future.apply:::future_xapply(...) 36. └─base::tryCatch(...) 37. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 38. └─base (local) tryCatchOne(...) 39. └─value[[3L]](cond) 40. └─future.apply:::onError(e, futures = fs, debug = debug) ── Error ('test-CRAN.R:775:3'): mlr3torch history and weights saved ──────────── <std::runtime_error/C++Error/error/condition> Error in `cpp_cuda_is_available()`: Lantern is not loaded. Please use `install_torch()` to install additional dependencies. Backtrace: ▆ 1. └─mlr3resampling::proj_compute_until_done(pkg.proj.dir) at test-CRAN.R:775:3 2. └─mlr3resampling::proj_compute(proj_dir, verbose = verbose) 3. └─this.learner$train(this.task, set_rows("train")) 4. └─mlr3:::.__Learner__train(...) 5. └─mlr3:::learner_train(...) 6. └─mlr3misc::encapsulate(...) 7. ├─mlr3misc::invoke(...) 8. │ └─base::eval.parent(expr, n = 1L) 9. │ └─base::eval(expr, p) 10. │ └─base::eval(expr, p) 11. └─mlr3 (local) .f(learner = `<S3: AutoTuner>`, task = `<S3: TaskRegr>`) 12. └─get_private(learner)$.train(task) 13. └─mlr3tuning:::.__AutoTuner__.train(...) 14. └─self$tuner$optimize(instance) 15. └─mlr3tuning:::.__TunerBatch__optimize(...) 16. └─bbotk::optimize_batch_default(inst, self) 17. ├─base::tryCatch(...) 18. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 19. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 20. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 21. └─get_private(optimizer)$.optimize(instance) 22. └─mlr3tuning:::.__TunerBatchInternal__.optimize(...) 23. └─inst$eval_batch(data.table()) 24. └─bbotk:::.__OptimInstanceBatch__eval_batch(...) 25. └─self$objective$eval_many(list(list())) 26. └─bbotk:::.__Objective__eval_many(...) 27. ├─mlr3misc::invoke(private$.eval_many, xss = xss, .args = self$constants$values) 28. │ └─base::eval.parent(expr, n = 1L) 29. │ └─base::eval(expr, p) 30. │ └─base::eval(expr, p) 31. └─private$.eval_many(xss = xss, resampling = `<list>`) 32. └─mlr3tuning:::.__ObjectiveTuningBatch__.eval_many(...) 33. └─mlr3::benchmark(...) 34. └─mlr3:::future_map(...) 35. └─future.apply::future_mapply(...) 36. └─future.apply:::future_xapply(...) 37. └─base::tryCatch(...) 38. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 39. └─base (local) tryCatchOne(...) 40. └─value[[3L]](cond) 41. └─future.apply:::onError(e, futures = fs, debug = debug) [ FAIL 2 | WARN 3 | SKIP 0 | PASS 101 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64

Package nc

Current CRAN status: OK: 13

Package neuroblastoma

Current CRAN status: NOTE: 3, OK: 10

Version: 2023.9.3
Check: installed package size
Result: NOTE installed size is 7.9Mb sub-directories of 1Mb or more: data 7.8Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package PeakError

Current CRAN status: NOTE: 2, OK: 11

Version: 2023.9.4
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Toby Dylan Hocking <toby.hocking@r-project.org>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: person(given = c("Toby", "Dylan"), family = "Hocking", role = c("aut", "cre"), email = "toby.hocking@r-project.org") as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package PeakSegDisk

Current CRAN status: OK: 13

Package PeakSegDP

Current CRAN status: NOTE: 2, OK: 11

Version: 2024.1.24
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Toby Dylan Hocking <toby.hocking@r-project.org>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = c("Toby", "Dylan"), family = "Hocking", role = c("aut", "cre"), email = "toby.hocking@r-project.org"), person(given = "Guillem", family = "Rigaill", role = "aut")) as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package PeakSegJoint

Current CRAN status: OK: 13

Package PeakSegOptimal

Current CRAN status: OK: 13

Package penaltyLearning

Current CRAN status: OK: 13

Package plotHMM

Current CRAN status: OK: 13

Package slurm

Current CRAN status: OK: 13

Package WeightedROC

Current CRAN status: NOTE: 13

Version: 2020.1.31
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Toby Dylan Hocking <toby.hocking@r-project.org>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: person(given = c("Toby", "Dylan"), family = "Hocking", role = c("aut", "cre"), email = "toby.hocking@r-project.org") as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2020.1.31
Check: Rd files
Result: NOTE checkRd: (-1) WeightedROC.Rd:10: Lost braces; missing escapes or markup? 10 | integer/numeric with values all in {0=negative,1=positive} or | ^ checkRd: (-1) WeightedROC.Rd:11: Lost braces; missing escapes or markup? 11 | {1=negative,2=positive} or {-1=negative,1=positive}.} | ^ checkRd: (-1) WeightedROC.Rd:11: Lost braces; missing escapes or markup? 11 | {1=negative,2=positive} or {-1=negative,1=positive}.} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64