Last updated on 2025-10-24 12:50:50 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| tepr | 1 | 1 | 11 |
Current CRAN status: ERROR: 1, NOTE: 1, OK: 11
Version: 1.1.10
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘tepr.Rmd’ using rmarkdown
Quitting from tepr.Rmd:25-82 [quickstart]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `retrievechrom()`:
!
The genome hg38 was not found with the function rtracklayer::SeqinfoForUCSCGenome. Check the spelling or verify if the genome is available on UCSC. The connection to UCSC can also have some hickup. You can callagain the function using the chromtab parameter: chromtab <- rtracklayer::SeqinfoForUCSCGenome(genomename).
---
Backtrace:
▆
1. └─tepr::retrievechrom(genomename, verbose = FALSE, filterchrom = FALSE)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tepr.Rmd' failed with diagnostics:
The genome hg38 was not found with the function rtracklayer::SeqinfoForUCSCGenome. Check the spelling or verify if the genome is available on UCSC. The connection to UCSC can also have some hickup. You can callagain the function using the chromtab parameter: chromtab <- rtracklayer::SeqinfoForUCSCGenome(genomename).
--- failed re-building ‘tepr.Rmd’
SUMMARY: processing the following file failed:
‘tepr.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.1.10
Check: installed package size
Result: NOTE
installed size is 5.0Mb
sub-directories of 1Mb or more:
doc 2.0Mb
extdata 2.6Mb
Flavor: r-oldrel-macos-x86_64