Last updated on 2025-12-15 00:50:52 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.26 | 255.73 | 265.99 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 317.11 | 340.11 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 182.00 | 193.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 216.00 | 227.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 232.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/129s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.802, system: 0.095, elapsed: 2.517 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.798, system: 0.299, elapsed: 13.546 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.018, elapsed: 0.238 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.968, system: 0.275, elapsed: 4.672 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.007, elapsed: 0.202 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.498, system: 0.726, elapsed: 21.871 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.688, system: 0.076, elapsed: 1.975 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.919, system: 0.357, elapsed: 16.480 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.539 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.083, system: 0.192, elapsed: 6.780 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.012, elapsed: 0.264 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.654, system: 0.686, elapsed: 26.966 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.663, system: 0.060, elapsed: 2.047 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.536, system: 0.092, elapsed: 15.180 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.012, elapsed: 0.325 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.945, system: 0.173, elapsed: 6.399 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.017, elapsed: 0.284 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.199, system: 0.238, elapsed: 1.043 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.394, system: 0.636, elapsed: 26.216 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.036, elapsed: 2.094 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.537, system: 0.061, elapsed: 15.277 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.989, system: 0.177, elapsed: 7.260 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.005, elapsed: 0.310 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.905, system: 0.495, elapsed: 19.805 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.016, system: 0.806, elapsed: 46.097 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/149s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.573, system: 0.038, elapsed: 2.879 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.621, system: 0.091, elapsed: 18.347 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.015, elapsed: 0.377 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.805, system: 0.190, elapsed: 6.405 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.010, elapsed: 0.256 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.944, system: 0.372, elapsed: 29.304 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.582, system: 0.036, elapsed: 2.197 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.527, system: 0.092, elapsed: 17.930 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.014, elapsed: 0.361 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.908, system: 0.182, elapsed: 6.957 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.947, system: 0.357, elapsed: 28.673 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.644, system: 0.039, elapsed: 2.911 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.591, system: 0.078, elapsed: 18.067 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.011, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.788, system: 0.177, elapsed: 8.136 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.006, elapsed: 0.420 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.132, system: 0.271, elapsed: 1.656 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.177, system: 0.610, elapsed: 32.800 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.567, system: 0.030, elapsed: 2.729 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.672, system: 0.074, elapsed: 17.994 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.013, elapsed: 0.339 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.758, system: 0.173, elapsed: 6.790 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.341 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.765, system: 0.476, elapsed: 20.230 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.809, system: 0.794, elapsed: 49.769 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64