Last updated on 2025-11-03 12:49:56 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.75 | 244.69 | 257.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.68 | 268.38 | 279.06 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 185.00 | 196.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 183.00 | 195.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/140s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.777, system: 0.084, elapsed: 3.169 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.715, system: 0.273, elapsed: 15.463 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.017, elapsed: 0.443 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.126, system: 0.280, elapsed: 6.746 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.007, elapsed: 0.258 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.565, system: 0.698, elapsed: 27.040 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.762, system: 0.092, elapsed: 2.881 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.826, system: 0.256, elapsed: 14.931 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.017, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.915, system: 0.218, elapsed: 5.793 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.010, elapsed: 0.290 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.435, system: 0.624, elapsed: 25.078 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.948, system: 0.107, elapsed: 3.065 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.756, system: 0.352, elapsed: 13.644 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.018, elapsed: 0.308 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.245, system: 0.353, elapsed: 6.581 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.006, elapsed: 0.271 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.209, system: 0.220, elapsed: 1.532 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.170, system: 1.091, elapsed: 26.360 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.638, system: 0.051, elapsed: 3.346 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.508, system: 0.120, elapsed: 19.079 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.012, elapsed: 0.395 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.015, system: 0.203, elapsed: 8.242 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.316 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.912, system: 0.507, elapsed: 19.763 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.119, system: 0.929, elapsed: 52.439 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/180s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.631, system: 0.040, elapsed: 2.618 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.408, system: 0.086, elapsed: 15.618 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.013, elapsed: 0.363 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.678, system: 0.184, elapsed: 6.303 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.006, elapsed: 0.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.631, system: 0.355, elapsed: 26.107 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.582, system: 0.031, elapsed: 2.626 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.413, system: 0.064, elapsed: 15.694 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.011, elapsed: 0.306 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.791, system: 0.165, elapsed: 7.486 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.006, elapsed: 0.496 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.692, system: 0.312, elapsed: 27.564 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.032, elapsed: 4.253 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.358, system: 0.059, elapsed: 24.427 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.011, elapsed: 0.545 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.838, system: 0.178, elapsed: 10.981 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.014, elapsed: 0.525 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.118, system: 0.253, elapsed: 1.925 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.933, system: 0.581, elapsed: 44.441 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.608, system: 0.047, elapsed: 4.160 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.482, system: 0.123, elapsed: 25.594 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.011, elapsed: 0.519 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.770, system: 0.196, elapsed: 10.666 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.466 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.510, system: 0.462, elapsed: 28.040 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.383, system: 0.873, elapsed: 71.280 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64