CRAN Package Check Results for Maintainer ‘Jesse Bennett <j3553 at ufl.edu>’

Last updated on 2025-10-24 12:50:45 CEST.

Package	ERROR	OK
ridigbio	1	12

Package ridigbio

Current CRAN status: ERROR: 1, OK: 12

Version: 0.4.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘BadCoordinateID.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘BadCoordinateID.Rmd’ --- re-building ‘BasicUsage.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘BasicUsage.Rmd’ --- re-building ‘Fields.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘Fields.Rmd’ --- re-building ‘FindTissue.Rmd’ using rmarkdown Quitting from FindTissue.Rmd:58-75 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `if ((limit == 0 || limit > max_items) && item_count > max_items) ...`: ! missing value where TRUE/FALSE needed --- Backtrace: ▆ 1. └─ridigbio::idig_search_records(...) 2. └─ridigbio::idig_search(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'FindTissue.Rmd' failed with diagnostics: missing value where TRUE/FALSE needed --- failed re-building ‘FindTissue.Rmd’ --- re-building ‘IDDataFlags.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘IDDataFlags.Rmd’ --- re-building ‘MediaAPIDemo.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘MediaAPIDemo.Rmd’ --- re-building ‘ModifiedDataID.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘ModifiedDataID.Rmd’ --- re-building ‘RecordAPIDemo.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. [WARNING] Div at RecordAPIDemo.knit.md line 200 column 1 unclosed at RecordAPIDemo.knit.md line 12256 column 1, closing implicitly. --- finished re-building ‘RecordAPIDemo.Rmd’ --- re-building ‘ridigbio.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘ridigbio.Rmd’ SUMMARY: processing the following file failed: ‘FindTissue.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc