faa2c895352a36b58985c5e012b1acce *DESCRIPTION
2cb2008ca9c85d80075973208f65772b *LICENSE
209f65e9390284dccca387f6a4d9d4cd *NAMESPACE
ec656d1c006b615c9be8ce1fafeefe23 *R/00_internal_helpers.R
61075711c6a7183a3429db3e7759d4cc *R/10_survival_cut_cox_km.R
6d812be45eae1b9af87d15d15503c6d2 *R/11_surv_box_plot.R
4af21040a8979bbc608298ee381d8873 *R/12_cor_and_hyper.R
5da61702b377f532b70aefdc431372eb *R/13_network_edge_node.R
d5b9fdbd348f1d895bbc16233a7f52ad *R/14_dumd_all.R
4aa6335f526b48dba6b73a9a250f1ab1 *R/15_auto_geo_group.R
98f076f806535a239b1396203c883a25 *R/1_plots.R
14881b23fc6eba07dc53fd46ad54d3a9 *R/2_geo_id.R
c7af42ed572723e16d35985b31e218cc *R/3_get_deg.R
4cdefdd4282236ff3e1adb33372601c9 *R/4_multi_deg.R
fe02fd149d6d57a8a4d73880530f37f9 *R/5_get_deg_all.R
28b88b8eb4e92d0d0928126415aee38f *R/6_multi_deg_all.R
4189b4b9eaab6579b44c153185897726 *R/7_quick_double_enrich.R
b2b596be21f6eba6515d66936c525f61 *R/8_tcga_group_trans_exp.R
71f44ec21551301c53c84b4d4ef01275 *R/9_cor_t_choose.R
fe6cf0371b3b2cfdf1041bf1e6261daf *R/data.R
d41d8cd98f00b204e9800998ecf8427e *R/get_anno.R
4ff42383e85e3d568fe7c031129cfbc5 *R/start_massage.R
797abd50d5f746cac0d95673d810116d *README.md
972beb29fca7ebc5e05bc08e7163efb5 *data/cod.rda
836a1b68dfd9ba65c4d1455f46feb0be *data/deg.rda
05d09e8caa9745805dc3156d542409ee *data/deseq_data.rda
45a548228aba7f30fe8df8f36bd9efce *data/exists_anno_list.rda
196576b3eca16900b2bcb355f918339a *data/exp_hub1.rda
70e6479b1ea12410bf1b596ac5d2aa66 *data/exprSet_hub1.rda
eec3b332efe48a71f2e23ebcdc161c9e *data/genes.rda
28b2fd77714a20e403b53d3283fdf1a7 *data/lnc_anno.rda
b43c88f21bf8f80ff2c3e8ffdabca116 *data/mRNA_anno.rda
9e79d4c24ee553b6d80bdd4f9752cad8 *data/meta1.rda
0f94447236cf9e2f931097fc1af2f835 *data/pkg_all.rda
15bd12b84fe1be3ed2622a224474cade *inst/WORDLIST
82bcb176f632753959807e5f81601625 *man/auto_geo_group.Rd
0b16ec58110a6a57df5d94e2f15776d0 *man/box_surv.Rd
26df8c0280d3e4db76c0e9ec45cf543f *man/cod.Rd
1edfc1de9d091a29cb43a0305734aaf1 *man/cor.full.Rd
8a38330efede5c73f02798e214967c29 *man/cor.one.Rd
9fe7865709a49183a1084dccd530b014 *man/corheatmap.Rd
935649e20abf4a6bcd461138bca8e1df *man/corscatterplot.Rd
fe8d913daf505ba25a9c3bd3f51ab454 *man/deg.Rd
8b9eac7082f34d08af98701cf2fee755 *man/deseq_data.Rd
41d88b2e4d787a10b97e2ec9397c289b *man/double_enrich.Rd
4c931e5a2385c1a551c86c58ca4bc469 *man/draw_KM.Rd
65f407e765b78976506dae485fa27e9d *man/draw_boxplot.Rd
259e1e3c9c20ff0a09ee8d128f16b974 *man/draw_heatmap.Rd
0256d5a9e1e92025e010b21984f9ba5d *man/draw_heatmap2.Rd
e6d6f470c970945fcbb4bf654ed159c4 *man/draw_pca.Rd
5973ef169f1938d08b504a1a5fdd4f0e *man/draw_tsne.Rd
f1662a9372cb1239e57dbeefa20f5b05 *man/draw_venn.Rd
e20c008e3c061176ec4c0666fbb026cf *man/draw_volcano.Rd
20cbae33735af3426eec3a667a66eafc *man/draw_volcano2.Rd
bba4e9e6252054a98263aecae9fc77bd *man/dumd.Rd
0afd29656a3ae0366fb136f3577fec15 *man/edges_to_nodes.Rd
344a5cb84eb0683838d67fbb4df253bd *man/exists_anno_list.Rd
0d15780f4c142bf8e2ece7dc7ae8c60d *man/exp_boxplot.Rd
b63125af51ff0657556397259a120401 *man/exp_hub1.Rd
db3b7e59a09bc2674b698befb8143b59 *man/exp_surv.Rd
5db1dd78f9291333986e778746c503f7 *man/exprSet_hub1.Rd
bc626b589132f6d961c76652b2da29bd *man/find_anno.Rd
59f3cb129d1d886ef87e9a7af92e0606 *man/genes.Rd
a373f37fac788ac1347676daa1afe509 *man/geo_download.Rd
6919ee2a13484f4529485d97532526eb *man/geo_parser.Rd
c5b54d4c85aabbd2699fecf69753ac72 *man/get_cgs.Rd
82e7f94fe2868e71ea6a87b97d27e277 *man/get_count_txt.Rd
733d7d667a221515a3ff481309520484 *man/get_deg.Rd
3aa83339ca1bea1760119c042139bbd5 *man/get_deg_all.Rd
fe38d8f5bf4b6719e9b3ac424b41fae4 *man/get_gpl_txt.Rd
c38de5d42f2748f70a3de5cd511e213c *man/get_ids.Rd
e02e14f63acca96893cdf1ecfd7a2dd8 *man/ggheat.Rd
969edc35ac2c944f9cafb51a4f948cb6 *man/hypertest.Rd
5721b67b9515646c015ad71ba999953d *man/interaction_to_edges.Rd
63ddda8f74fb862e761ef223f2675540 *man/intersect_all.Rd
9a08f49934759cc09fe59a7d3cf311e8 *man/lnc_anno.Rd
8dbb61587db2ee1e3ae04e2252580464 *man/mRNA_anno.Rd
08558727415e461fcaca098b70fcaaad *man/make_tcga_group.Rd
f591c0d79574ac7ecbed9a7bdd231583 *man/match_exp_cl.Rd
8ad18e01a49f1930656d0974bf584be7 *man/meta1.Rd
7d546c7ff7f06e40f0fbb5d05f1b9e93 *man/multi_deg.Rd
bffef0c06568eea8c2993e4976d2cf32 *man/multi_deg_all.Rd
ca1f26696f81d99460eb6a3829dd7683 *man/pkg_all.Rd
d31daa07b085640e2671eeca64060cc7 *man/plcortest.Rd
763a7bc0e21c9e573e69ad38be866319 *man/plot_deg.Rd
17ae26bd89ae37f668e1ed8be3c89101 *man/point_cut.Rd
9d829ae19c545a2154989cf6ad772542 *man/print.geo_auto_group.Rd
071499ad12addd0f59f983fdcb390e31 *man/quick_enrich.Rd
fc83464c4aad808b98934736717b2292 *man/risk_plot.Rd
9093f27aea0892ca955320ea44c84e88 *man/sam_filter.Rd
e0de8e26b83d4a50de81dcaced2684bc *man/surv_KM.Rd
ccd817420d487405c0817d88914fd856 *man/surv_cox.Rd
1b2796e2c6e9b3e700ac201df35a63fb *man/t_choose.Rd
5807daa599f90502fd11b556b251914c *man/trans_array.Rd
3fa951eb897b2015dd1f4367ebfe0906 *man/trans_ensembl_exp.Rd
eef1cbdbcd1bedb9072b2a4f2cfcf8b8 *man/trans_entrezexp.Rd
011fcd3086fdab9293f14043254ddb8c *man/trans_exp.Rd
6cdac44a973cc3e823b0dd47d9971862 *man/trans_exp_new.Rd
ca064d8e4845ee7fe93d44c9ea968d3d *man/union_all.Rd
