Trees and Traits Simulations

Documentation for package ‘treats’ version 1.1.6

age.condition	events.conditions
bd.params.update	Events modifications
BM.process	Trait processes
branch.length	Modifiers
branch.length.trait	Modifiers
crude.bd.est	Crudely estimates extinction and speciation
discrete.process	Trait processes
dispRitreats	dispRity interface for treats objects
drop.fossils	Drop things from a treats object
drop.livings	Drop things from a treats object
drop.singles	Drop things from a treats object
drop.things	Drop things from a treats object
drop.tip.treats	drop.tip.treats
events.condition	events.conditions
events.conditions	events.conditions
events.modification	Events modifications
events.modifications	Events modifications
founding.event	Events modifications
keep.tip.treats	drop.tip.treats
link.traits	link.traits
make.bd.params	Make birth death parameters
make.events	make.events
make.modifiers	make.modifiers
make.traits	make.traits
make.treats	Make a treats object
map.traits	Maps a trait on a tree
modifiers	Modifiers
modifiers.update	Events modifications
multi.peak.process	Trait processes
no.process	Trait processes
OU.process	Trait processes
parent.traits	Get parent traits
plot.treats	Plot treats objects
print.treats	Prints a 'treats' object.
random.extinction	Events modifications
repulsion.process	Trait processes
selection	Modifiers
speciation	Modifiers
speciation.trait	Modifiers
taxa.condition	events.conditions
trait.condition	events.conditions
trait.extinction	Events modifications
trait.process	Trait processes
traits.update	Events modifications
transition.matrix	Makes a transition matrix
treats	Diversity and disparity simulator