Last updated on 2025-11-30 12:50:01 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.2 | 11.44 | 128.77 | 140.21 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.5.2 | 9.60 | 85.29 | 94.89 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.5.2 | 34.00 | 181.16 | 215.16 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.5.2 | 60.00 | 185.15 | 245.15 | OK | |
| r-devel-windows-x86_64 | 0.5.2 | 16.00 | 130.00 | 146.00 | OK | |
| r-patched-linux-x86_64 | 0.5.2 | 13.50 | 122.62 | 136.12 | OK | |
| r-release-linux-x86_64 | 0.5.2 | 13.08 | 114.01 | 127.09 | ERROR | |
| r-release-macos-arm64 | 0.5.2 | OK | ||||
| r-release-macos-x86_64 | 0.5.2 | 11.00 | 252.00 | 263.00 | OK | |
| r-release-windows-x86_64 | 0.5.2 | 15.00 | 151.00 | 166.00 | OK | |
| r-oldrel-macos-arm64 | 0.5.2 | OK | ||||
| r-oldrel-macos-x86_64 | 0.5.2 | 10.00 | 93.00 | 103.00 | OK | |
| r-oldrel-windows-x86_64 | 0.5.2 | 21.00 | 167.00 | 188.00 | OK |
Version: 0.5.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [6s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # see https://github.com/rstudio/shinytest2/issues/351
> options(chromote.timeout = 120)
>
> library(testthat)
> library(shinyMixR)
Loading required package: shiny
Loading required package: ggplot2
> library(nlmixr2)
── Attaching packages ───────────────────────────────────────── nlmixr2 4.0.1 ──
✔ lotri 1.0.2 ✔ nlmixr2plot 3.0.3
✔ nlmixr2data 2.0.9 ✔ rxode2 5.0.0
✔ nlmixr2est 5.0.2 ✔ xpose.nlmixr2 0.4.1
✔ nlmixr2extra 5.0.0
── Optional Packages Loaded/Ignored ─────────────────────────── nlmixr2 4.0.1 ──
✔ shinyMixR ✖ nlmixr2lib
✔ xpose.nlmixr2 ✖ nlmixr2rpt
✖ babelmixr2 ✖ nonmem2rx
✖ ggPMX ✖ posologyr
✖ monolix2rx
── Conflicts ───────────────────────────────────────────── nlmixr2conflicts() ──
✖ rxode2::boxCox() masks nlmixr2est::boxCox()
✖ rxode2::yeoJohnson() masks nlmixr2est::yeoJohnson()
>
> test_check("shinyMixR")
Error : package "qs" needed for this function to work
Saving _problems/test-gof_plot-10.R
Saving _problems/test-update_inits-9.R
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 23 ]
══ Skipped tests (11) ══════════════════════════════════════════════════════════
• On CRAN (11): 'test-module_dataexplore.R:3:3', 'test-module_metadata.R:3:3',
'test-module_report.R:4:3', 'test-module_run.R:3:3',
'test-module_script.R:3:3', 'test-module_settings.R:3:3',
'test-run_nmx.R:3:3', 'test-run_shinymixr.R:3:3',
'test-shinymixr-01-model-run1.R:8:3',
'test-shinymixr-02-parameter-table.R:6:3',
'test-shinymixr-03-create-newmodel.R:6:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-gof_plot.R:10:3'): gof_plot works as expected ──────────────────
Error in `seq_len(nrow(.origData))`: argument must be coercible to non-negative integer
Backtrace:
▆
1. ├─base::suppressWarnings(gof_plot(res, ptype = "all", type = "xpose")) at test-gof_plot.R:10:3
2. │ └─base::withCallingHandlers(...)
3. └─shinyMixR::gof_plot(res, ptype = "all", type = "xpose")
4. └─xpose.nlmixr2::xpose_data_nlmixr2(dfrm)
5. ├─obj$dataMergeInner
6. └─nlmixr2est:::`$.nlmixr2FitData`(obj, "dataMergeInner")
7. ├─nlmixr2est::nmObjGetData(.lst)
8. └─nlmixr2est:::nmObjGetData.dataMergeInner(.lst)
9. └─nlmixr2est:::.dataMergeStub(.obj, preferFit = FALSE)
── Error ('test-update_inits.R:9:3'): update_inits works as expected ───────────
Error: package "qs" needed for this function to work
Backtrace:
▆
1. └─shinyMixR::update_inits(...) at test-update_inits.R:9:3
2. ├─ores$ui
3. └─nlmixr2est:::`$.nlmixr2FitData`(ores, "ui")
4. └─nlmixr2est:::`$.nlmixr2FitCore`(.env, arg, exact)
5. ├─nlmixr2est::nmObjGet(.lst)
6. └─nlmixr2est:::nmObjGet.ui(.lst)
7. ├─nlmixr2est:::.cloneEnv(rxode2::rxUiDecompress(get("ui", .env)))
8. └─rxode2::rxUiDecompress(get("ui", .env))
9. └─rxode2::rxReq("qs")
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 23 ]
Deleting unused snapshots: 'shinymixr-02-parameter-table/run2-model-001.json',
'shinymixr-02-parameter-table/run2-model-001_.png',
'shinymixr-02-parameter-table/run2-model-002.json',
'shinymixr-02-parameter-table/run2-model-002_.png',
'shinymixr-03-create-newmodel/run3-model-001.json',
'shinymixr-03-create-newmodel/run3-model-001_.png',
'shinymixr-03-create-newmodel/run3-model-002.json', and
'shinymixr-03-create-newmodel/run3-model-002_.png'
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.5.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [14s/17s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # see https://github.com/rstudio/shinytest2/issues/351
> options(chromote.timeout = 120)
>
> library(testthat)
> library(shinyMixR)
Loading required package: shiny
Loading required package: ggplot2
> library(nlmixr2)
── Attaching packages ───────────────────────────────────────── nlmixr2 4.0.1 ──
✔ lotri 1.0.2 ✔ nlmixr2plot 3.0.3
✔ nlmixr2data 2.0.9 ✔ rxode2 5.0.0
✔ nlmixr2est 4.1.1 ✔ xpose.nlmixr2 0.4.1
✔ nlmixr2extra 3.0.2
── Optional Packages Loaded/Ignored ─────────────────────────── nlmixr2 4.0.1 ──
✔ shinyMixR ✖ nlmixr2lib
✔ xpose.nlmixr2 ✖ nlmixr2rpt
✖ babelmixr2 ✖ nonmem2rx
✖ ggPMX ✖ posologyr
✖ monolix2rx
── Conflicts ───────────────────────────────────────────── nlmixr2conflicts() ──
✖ rxode2::boxCox() masks nlmixr2est::boxCox()
✖ rxode2::yeoJohnson() masks nlmixr2est::yeoJohnson()
>
> test_check("shinyMixR")
Saving _problems/test-update_inits-9.R
[ FAIL 1 | WARN 0 | SKIP 12 | PASS 23 ]
══ Skipped tests (12) ══════════════════════════════════════════════════════════
• On CRAN (11): 'test-module_dataexplore.R:3:3', 'test-module_metadata.R:3:3',
'test-module_report.R:4:3', 'test-module_run.R:3:3',
'test-module_script.R:3:3', 'test-module_settings.R:3:3',
'test-run_nmx.R:3:3', 'test-run_shinymixr.R:3:3',
'test-shinymixr-01-model-run1.R:8:3',
'test-shinymixr-02-parameter-table.R:6:3',
'test-shinymixr-03-create-newmodel.R:6:3'
• {qs} is not installed. (1): 'test-gof_plot.R:10:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-update_inits.R:9:3'): update_inits works as expected ───────────
Error: package "qs" needed for this function to work
Backtrace:
▆
1. └─shinyMixR::update_inits(...) at test-update_inits.R:9:3
2. ├─ores$ui
3. └─nlmixr2est:::`$.nlmixr2FitData`(ores, "ui")
4. └─nlmixr2est:::`$.nlmixr2FitCore`(.env, arg, exact)
5. ├─nlmixr2est::nmObjGet(.lst)
6. └─nlmixr2est:::nmObjGet.ui(.lst)
7. ├─nlmixr2est:::.cloneEnv(rxode2::rxUiDecompress(get("ui", .env)))
8. └─rxode2::rxUiDecompress(get("ui", .env))
9. └─rxode2::rxReq("qs")
[ FAIL 1 | WARN 0 | SKIP 12 | PASS 23 ]
Deleting unused snapshots: 'shinymixr-02-parameter-table/run2-model-001.json',
'shinymixr-02-parameter-table/run2-model-001_.png',
'shinymixr-02-parameter-table/run2-model-002.json',
'shinymixr-02-parameter-table/run2-model-002_.png',
'shinymixr-03-create-newmodel/run3-model-001.json',
'shinymixr-03-create-newmodel/run3-model-001_.png',
'shinymixr-03-create-newmodel/run3-model-002.json', and
'shinymixr-03-create-newmodel/run3-model-002_.png'
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.5.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # see https://github.com/rstudio/shinytest2/issues/351
> options(chromote.timeout = 120)
>
> library(testthat)
> library(shinyMixR)
Loading required package: shiny
Loading required package: ggplot2
> library(nlmixr2)
── Attaching packages ───────────────────────────────────────── nlmixr2 4.0.1 ──
✔ lotri 1.0.2 ✔ nlmixr2plot 3.0.3
✔ nlmixr2data 2.0.9 ✔ rxode2 5.0.0
✔ nlmixr2est 5.0.2 ✔ xpose.nlmixr2 0.4.1
✔ nlmixr2extra 3.0.2
── Optional Packages Loaded/Ignored ─────────────────────────── nlmixr2 4.0.1 ──
✔ shinyMixR ✖ nlmixr2lib
✔ xpose.nlmixr2 ✖ nlmixr2rpt
✖ babelmixr2 ✖ nonmem2rx
✖ ggPMX ✖ posologyr
✖ monolix2rx
── Conflicts ───────────────────────────────────────────── nlmixr2conflicts() ──
✖ rxode2::boxCox() masks nlmixr2est::boxCox()
✖ rxode2::yeoJohnson() masks nlmixr2est::yeoJohnson()
>
> test_check("shinyMixR")
Error : package "qs" needed for this function to work
Saving _problems/test-gof_plot-10.R
Saving _problems/test-update_inits-9.R
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 23 ]
══ Skipped tests (11) ══════════════════════════════════════════════════════════
• On CRAN (11): 'test-module_dataexplore.R:3:3', 'test-module_metadata.R:3:3',
'test-module_report.R:4:3', 'test-module_run.R:3:3',
'test-module_script.R:3:3', 'test-module_settings.R:3:3',
'test-run_nmx.R:3:3', 'test-run_shinymixr.R:3:3',
'test-shinymixr-01-model-run1.R:8:3',
'test-shinymixr-02-parameter-table.R:6:3',
'test-shinymixr-03-create-newmodel.R:6:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-gof_plot.R:10:3'): gof_plot works as expected ──────────────────
Error in `seq_len(nrow(.origData))`: argument must be coercible to non-negative integer
Backtrace:
▆
1. ├─base::suppressWarnings(gof_plot(res, ptype = "all", type = "xpose")) at test-gof_plot.R:10:3
2. │ └─base::withCallingHandlers(...)
3. └─shinyMixR::gof_plot(res, ptype = "all", type = "xpose")
4. └─xpose.nlmixr2::xpose_data_nlmixr2(dfrm)
5. ├─obj$dataMergeInner
6. └─nlmixr2est:::`$.nlmixr2FitData`(obj, "dataMergeInner")
7. ├─nlmixr2est::nmObjGetData(.lst)
8. └─nlmixr2est:::nmObjGetData.dataMergeInner(.lst)
9. └─nlmixr2est:::.dataMergeStub(.obj, preferFit = FALSE)
── Error ('test-update_inits.R:9:3'): update_inits works as expected ───────────
Error: package "qs" needed for this function to work
Backtrace:
▆
1. └─shinyMixR::update_inits(...) at test-update_inits.R:9:3
2. ├─ores$ui
3. └─nlmixr2est:::`$.nlmixr2FitData`(ores, "ui")
4. └─nlmixr2est:::`$.nlmixr2FitCore`(.env, arg, exact)
5. ├─nlmixr2est::nmObjGet(.lst)
6. └─nlmixr2est:::nmObjGet.ui(.lst)
7. ├─nlmixr2est:::.cloneEnv(rxode2::rxUiDecompress(get("ui", .env)))
8. └─rxode2::rxUiDecompress(get("ui", .env))
9. └─rxode2::rxReq("qs")
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 23 ]
Deleting unused snapshots: 'shinymixr-02-parameter-table/run2-model-001.json',
'shinymixr-02-parameter-table/run2-model-001_.png',
'shinymixr-02-parameter-table/run2-model-002.json',
'shinymixr-02-parameter-table/run2-model-002_.png',
'shinymixr-03-create-newmodel/run3-model-001.json',
'shinymixr-03-create-newmodel/run3-model-001_.png',
'shinymixr-03-create-newmodel/run3-model-002.json', and
'shinymixr-03-create-newmodel/run3-model-002_.png'
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64