Last updated on 2025-04-04 12:52:37 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.2 | 18.12 | 2.42 | 20.54 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 2.1.2 | 13.06 | 2.10 | 15.16 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.1.2 | 37.62 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.2 | 36.34 | ERROR | |||
| r-devel-macos-arm64 | 2.1.2 | 108.00 | ERROR | |||
| r-devel-macos-x86_64 | 2.1.2 | 170.00 | OK | |||
| r-devel-windows-x86_64 | 2.1.2 | 34.00 | 261.00 | 295.00 | ERROR | |
| r-patched-linux-x86_64 | 2.1.2 | 27.30 | 232.15 | 259.45 | ERROR | |
| r-release-linux-x86_64 | 2.1.2 | 19.89 | 227.33 | 247.22 | OK | |
| r-release-macos-arm64 | 2.1.2 | 111.00 | OK | |||
| r-release-macos-x86_64 | 2.1.2 | 279.00 | OK | |||
| r-release-windows-x86_64 | 2.1.2 | 33.00 | 251.00 | 284.00 | OK | |
| r-oldrel-macos-arm64 | 2.1.2 | 108.00 | OK | |||
| r-oldrel-macos-x86_64 | 2.1.2 | 251.00 | OK | |||
| r-oldrel-windows-x86_64 | 2.1.2 | 40.00 | 321.00 | 361.00 | OK |
Version: 2.1.2
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 2.1.2
Check: tests
Result: ERROR
Running ‘testthat.r’ [10s/10s]
Running the tests in ‘tests/testthat.r’ failed.
Complete output:
> library(testthat)
> library(rbiom)
>
> test_check("rbiom")
[ FAIL 1 | WARN 0 | SKIP 34 | PASS 191 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (34): 'test-bdiv_heatmap.r:5:3', 'test-bdiv_ord_plot.r:6:3',
'test-biom_merge.r:11:3', 'test-biom_ply.r:9:3', 'test-biom_ply.r:48:3',
'test-boxplot.r:10:3', 'test-boxplot_build.r:3:3', 'test-cache.r:3:3',
'test-convert.r:5:3', 'test-convert.r:24:3', 'test-convert.r:40:3',
'test-corrplot.r:11:3', 'test-distmat_ord_table.r:6:3',
'test-import_table.r:13:3', 'test-plot_heatmap.r:15:3',
'test-plot_palettes.r:6:3', 'test-provenance.r:3:3', 'test-rarefy.r:3:3',
'test-rbiom-deprecated.r:3:3', 'test-rbiom_objects.r:24:3',
'test-read_biom.r:3:3', 'test-read_fasta.r:3:3', 'test-read_tree.r:7:3',
'test-s3_methods.r:3:3', 'test-stats_emmeans.r:8:3',
'test-stats_wilcox.r:3:3', 'test-taxa_heatmap.r:5:3', 'test-taxa_map.r:3:3',
'test-taxa_stacked.r:5:3', 'test-taxa_table.r:3:3', 'test-utils.r:3:3',
'test-validate.r:3:3', 'test-write_biom.r:15:3', 'test-write_xlsx.r:3:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-boxplot.r:7:3'): boxplot ─────────────────────────────────────
`taxa_boxplot(rare5)` produced warnings.
[ FAIL 1 | WARN 0 | SKIP 34 | PASS 191 ]
Error: Test failures
Execution halted
Flavor: r-devel-macos-arm64
Version: 2.1.2
Check: whether the namespace can be loaded with stated dependencies
Result: NOTE
Warning in attr(ENV[[i]], "fn") <- i :
Setting attributes on primitive functions is deprecated and will be disabled
A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.
Probably some imports need to be declared in the NAMESPACE file.
Flavor: r-devel-windows-x86_64
Version: 2.1.2
Check: tests
Result: ERROR
Running 'testthat.r' [22s]
Running the tests in 'tests/testthat.r' failed.
Complete output:
> library(testthat)
> library(rbiom)
Warning message:
In attr(ENV[[i]], "fn") <- i :
Setting attributes on primitive functions is deprecated and will be disabled
>
> test_check("rbiom")
[ FAIL 1 | WARN 0 | SKIP 34 | PASS 191 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (34): 'test-bdiv_heatmap.r:5:3', 'test-bdiv_ord_plot.r:6:3',
'test-biom_merge.r:11:3', 'test-biom_ply.r:9:3', 'test-biom_ply.r:48:3',
'test-boxplot.r:10:3', 'test-boxplot_build.r:3:3', 'test-cache.r:3:3',
'test-convert.r:5:3', 'test-convert.r:24:3', 'test-convert.r:40:3',
'test-corrplot.r:11:3', 'test-distmat_ord_table.r:6:3',
'test-import_table.r:13:3', 'test-plot_heatmap.r:15:3',
'test-plot_palettes.r:6:3', 'test-provenance.r:3:3', 'test-rarefy.r:3:3',
'test-rbiom-deprecated.r:3:3', 'test-rbiom_objects.r:24:3',
'test-read_biom.r:3:3', 'test-read_fasta.r:3:3', 'test-read_tree.r:7:3',
'test-s3_methods.r:3:3', 'test-stats_emmeans.r:8:3',
'test-stats_wilcox.r:3:3', 'test-taxa_heatmap.r:5:3', 'test-taxa_map.r:3:3',
'test-taxa_stacked.r:5:3', 'test-taxa_table.r:3:3', 'test-utils.r:3:3',
'test-validate.r:3:3', 'test-write_biom.r:15:3', 'test-write_xlsx.r:3:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-boxplot.r:7:3'): boxplot ─────────────────────────────────────
`taxa_boxplot(rare5)` produced warnings.
[ FAIL 1 | WARN 0 | SKIP 34 | PASS 191 ]
Error: Test failures
Execution halted
Flavor: r-devel-windows-x86_64
Version: 2.1.2
Check: tests
Result: ERROR
Running ‘testthat.r’ [22s/31s]
Running the tests in ‘tests/testthat.r’ failed.
Complete output:
> library(testthat)
> library(rbiom)
>
> test_check("rbiom")
[ FAIL 1 | WARN 0 | SKIP 34 | PASS 191 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (34): 'test-bdiv_heatmap.r:5:3', 'test-bdiv_ord_plot.r:6:3',
'test-biom_merge.r:11:3', 'test-biom_ply.r:9:3', 'test-biom_ply.r:48:3',
'test-boxplot.r:10:3', 'test-boxplot_build.r:3:3', 'test-cache.r:3:3',
'test-convert.r:5:3', 'test-convert.r:24:3', 'test-convert.r:40:3',
'test-corrplot.r:11:3', 'test-distmat_ord_table.r:6:3',
'test-import_table.r:13:3', 'test-plot_heatmap.r:15:3',
'test-plot_palettes.r:6:3', 'test-provenance.r:3:3', 'test-rarefy.r:3:3',
'test-rbiom-deprecated.r:3:3', 'test-rbiom_objects.r:24:3',
'test-read_biom.r:3:3', 'test-read_fasta.r:3:3', 'test-read_tree.r:7:3',
'test-s3_methods.r:3:3', 'test-stats_emmeans.r:8:3',
'test-stats_wilcox.r:3:3', 'test-taxa_heatmap.r:5:3', 'test-taxa_map.r:3:3',
'test-taxa_stacked.r:5:3', 'test-taxa_table.r:3:3', 'test-utils.r:3:3',
'test-validate.r:3:3', 'test-write_biom.r:15:3', 'test-write_xlsx.r:3:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-boxplot.r:7:3'): boxplot ─────────────────────────────────────
`taxa_boxplot(rare5)` produced warnings.
[ FAIL 1 | WARN 0 | SKIP 34 | PASS 191 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64