Last updated on 2025-11-30 12:49:52 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 265.72 | 278.30 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.67 | 214.81 | 224.48 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.60 | 241.19 | 256.79 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.30 | 269.49 | 283.79 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 203.00 | 213.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 198.00 | 211.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/147s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.695, system: 0.067, elapsed: 4.352 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.823, system: 0.264, elapsed: 13.475 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.019, elapsed: 0.276 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.198, system: 0.282, elapsed: 7.439 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.012, elapsed: 0.526 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.667, system: 0.684, elapsed: 27.297 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.694, system: 0.058, elapsed: 4.271 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.715, system: 0.189, elapsed: 21.851 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.018, elapsed: 0.417 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.419, system: 0.334, elapsed: 8.947 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.010, elapsed: 0.414 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.775, system: 0.657, elapsed: 37.253 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.597, system: 0.035, elapsed: 3.573 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.628, system: 0.153, elapsed: 15.652 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.012, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.978, system: 0.193, elapsed: 5.473 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.012, elapsed: 0.354 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.317, system: 0.274, elapsed: 1.420 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.586, system: 0.736, elapsed: 28.046 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.890, system: 0.110, elapsed: 2.965 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.625, system: 0.135, elapsed: 14.429 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.014, elapsed: 0.350 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.946, system: 0.193, elapsed: 5.846 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.006, elapsed: 0.285 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.997, system: 0.522, elapsed: 17.155 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.511, system: 1.014, elapsed: 42.111 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.885, system: 0.111, elapsed: 3.935 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.450, system: 0.081, elapsed: 17.758 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.016, elapsed: 0.381 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.833, system: 0.206, elapsed: 7.588 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.320 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.108, system: 0.452, elapsed: 31.130 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.601, system: 0.033, elapsed: 2.806 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.515, system: 0.065, elapsed: 17.372 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.011, elapsed: 0.382 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.868, system: 0.182, elapsed: 8.116 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.007, elapsed: 0.413 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.928, system: 0.324, elapsed: 30.132 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.710, system: 0.038, elapsed: 3.362 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.666, system: 0.100, elapsed: 17.309 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.011, elapsed: 0.281 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.802, system: 0.187, elapsed: 6.793 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.005, elapsed: 0.416 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.164, system: 0.231, elapsed: 1.626 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.366, system: 0.614, elapsed: 31.200 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.621, system: 0.041, elapsed: 2.411 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.545, system: 0.115, elapsed: 16.228 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.372 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.832, system: 0.191, elapsed: 6.322 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.316 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.675, system: 0.493, elapsed: 17.951 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.691, system: 0.886, elapsed: 44.848 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64