Last updated on 2025-09-08 00:50:24 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.11 | 242.53 | 256.64 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.30 | 242.87 | 253.17 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 354.05 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.82 | 240.60 | 256.42 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.24 | 305.48 | 319.72 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 250.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 265.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 233.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/177s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.535, system: 0.067, elapsed: 2.526 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.208, system: 0.233, elapsed: 14.081 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.030, elapsed: 0.391 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.870, system: 0.336, elapsed: 5.661 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.007, elapsed: 0.192 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.531, system: 0.719, elapsed: 23.780 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.624, system: 0.081, elapsed: 2.094 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.372, system: 0.385, elapsed: 20.334 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.025, elapsed: 0.681 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.004, system: 0.313, elapsed: 13.192 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.005, elapsed: 0.481 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.939, system: 1.018, elapsed: 38.794 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.650, system: 0.059, elapsed: 5.251 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.416, system: 0.309, elapsed: 24.518 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.024, elapsed: 0.580 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.240, system: 0.485, elapsed: 11.090 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.017, elapsed: 0.395 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.273, system: 0.359, elapsed: 2.031 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.631, system: 1.317, elapsed: 45.632 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.778, system: 0.122, elapsed: 3.622 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.527, system: 0.470, elapsed: 19.073 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.031, elapsed: 0.367 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.884, system: 0.350, elapsed: 7.472 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.011, elapsed: 0.392 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.777, system: 1.048, elapsed: 26.878 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.080, system: 2.331, elapsed: 59.795 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/190s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.847, system: 0.130, elapsed: 3.633 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.296, system: 0.295, elapsed: 18.387 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.028, elapsed: 0.514 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.843, system: 0.338, elapsed: 5.928 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.010, elapsed: 0.291 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.897, system: 0.841, elapsed: 29.677 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.757, system: 0.105, elapsed: 3.556 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.456, system: 0.434, elapsed: 18.903 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.034, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.046, system: 0.442, elapsed: 8.852 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.022, elapsed: 0.562 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.245, system: 1.315, elapsed: 33.711 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.896, system: 0.142, elapsed: 5.479 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.411, system: 0.357, elapsed: 25.424 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.034, elapsed: 0.617 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.912, system: 0.396, elapsed: 11.310 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.032, elapsed: 0.526 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.188, system: 0.380, elapsed: 2.636 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.538, system: 1.712, elapsed: 49.153 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.573, system: 0.062, elapsed: 3.626 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.279, system: 0.265, elapsed: 21.129 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.030, elapsed: 0.494 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.880, system: 0.338, elapsed: 9.446 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.016, elapsed: 0.461 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.865, system: 1.038, elapsed: 26.537 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.736, system: 2.146, elapsed: 64.217 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64