Last updated on 2025-07-20 12:49:29 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 249.54 | 262.98 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.65 | 221.74 | 232.39 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.66 | 250.48 | 264.14 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 174.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 156.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 234.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.566, system: 0.055, elapsed: 2.388 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.057, system: 0.106, elapsed: 10.905 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.232 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.766, system: 0.195, elapsed: 5.277 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.269, system: 0.393, elapsed: 19.664 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.494, system: 0.038, elapsed: 2.169 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.126, system: 0.085, elapsed: 12.872 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.315 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.756, system: 0.173, elapsed: 6.220 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.271 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.272, system: 0.333, elapsed: 22.717 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.548, system: 0.038, elapsed: 2.811 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.243, system: 0.089, elapsed: 15.823 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.014, elapsed: 0.487 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.743, system: 0.184, elapsed: 9.909 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.357 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.159, system: 0.226, elapsed: 1.968 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.659, system: 0.579, elapsed: 32.709 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.466, system: 0.034, elapsed: 4.050 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.137, system: 0.054, elapsed: 16.669 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.695, system: 0.175, elapsed: 5.484 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.235 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.170, system: 0.463, elapsed: 14.982 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.470, system: 0.771, elapsed: 43.137 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/106s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.041, elapsed: 1.808 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.944, system: 0.073, elapsed: 11.017 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.560, system: 0.177, elapsed: 6.064 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.305 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.883, system: 0.328, elapsed: 20.226 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.035, elapsed: 2.989 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.944, system: 0.067, elapsed: 14.348 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.607, system: 0.165, elapsed: 6.179 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.008, elapsed: 0.300 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.018, system: 0.312, elapsed: 25.148 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.032, elapsed: 2.232 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.909, system: 0.047, elapsed: 12.751 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.490, system: 0.161, elapsed: 5.126 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.233 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.074, system: 0.204, elapsed: 0.935 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.971, system: 0.496, elapsed: 22.527 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.462, system: 0.027, elapsed: 2.098 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.988, system: 0.049, elapsed: 12.384 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.496, system: 0.179, elapsed: 4.660 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.006, elapsed: 0.226 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.875, system: 0.529, elapsed: 11.495 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.812, system: 0.831, elapsed: 32.055 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64