Last updated on 2025-11-05 00:49:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.73 | 259.99 | 272.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.64 | 232.61 | 243.25 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 195.00 | 206.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 169.00 | 179.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.053, elapsed: 1.809 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.773, system: 0.210, elapsed: 14.524 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.018, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.081, system: 0.276, elapsed: 6.261 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.005, elapsed: 0.236 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.378, system: 0.591, elapsed: 23.897 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.703, system: 0.072, elapsed: 2.569 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.774, system: 0.220, elapsed: 15.108 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.017, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.037, system: 0.239, elapsed: 6.131 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.006, elapsed: 0.343 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.450, system: 0.590, elapsed: 25.299 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.803, system: 0.071, elapsed: 3.037 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.604, system: 0.160, elapsed: 15.129 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.017, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.151, system: 0.333, elapsed: 7.700 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.010, elapsed: 0.384 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.293, system: 0.271, elapsed: 1.645 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.879, system: 0.899, elapsed: 29.357 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.768, system: 0.094, elapsed: 3.435 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.822, system: 0.233, elapsed: 19.478 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.434 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.255, system: 0.313, elapsed: 8.500 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.011, elapsed: 0.363 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.450, system: 0.815, elapsed: 25.422 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.373, system: 1.525, elapsed: 59.028 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.620, system: 0.057, elapsed: 2.197 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.624, system: 0.204, elapsed: 14.429 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.018, elapsed: 0.328 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.961, system: 0.277, elapsed: 6.427 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.009, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.150, system: 0.598, elapsed: 24.480 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.822, system: 0.084, elapsed: 2.631 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.817, system: 0.312, elapsed: 13.938 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.020, elapsed: 0.387 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.104, system: 0.330, elapsed: 6.303 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.011, elapsed: 0.207 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.682, system: 0.809, elapsed: 24.287 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.810, system: 0.084, elapsed: 2.257 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.425, system: 0.279, elapsed: 10.701 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.015, elapsed: 0.219 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.782, system: 0.230, elapsed: 4.768 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.013, elapsed: 0.235 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.133, system: 0.271, elapsed: 1.217 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.153, system: 0.934, elapsed: 20.233 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.720, system: 0.048, elapsed: 3.400 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.501, system: 0.105, elapsed: 13.789 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.839, system: 0.209, elapsed: 8.063 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.006, elapsed: 0.374 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.859, system: 0.507, elapsed: 18.019 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.951, system: 0.919, elapsed: 45.191 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64