Last updated on 2024-06-13 00:55:06 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.23 | 11.84 | 152.71 | 164.55 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.23 | 8.29 | 375.39 | 383.68 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.23 | 205.61 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.23 | 228.64 | OK | |||
| r-devel-windows-x86_64 | 1.23 | 16.00 | 255.00 | 271.00 | OK | |
| r-patched-linux-x86_64 | 1.23 | 22.11 | 143.72 | 165.83 | OK | |
| r-release-linux-x86_64 | 1.23 | 11.51 | 145.33 | 156.84 | OK | |
| r-release-macos-arm64 | 1.23 | 80.00 | OK | |||
| r-release-macos-x86_64 | 1.23 | 141.00 | OK | |||
| r-release-windows-x86_64 | 1.23 | 17.00 | 252.00 | 269.00 | OK | |
| r-oldrel-macos-arm64 | 1.23 | 87.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.23 | 265.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.23 | 21.00 | 316.00 | 337.00 | OK |
Version: 1.23
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'AER', 'broom', 'car', 'desplot', 'dplyr', 'effects', 'equivalence',
'FrF2', 'gge', 'ggplot2', 'HH', 'lme4', 'nullabor', 'pbkrtest',
'reshape2', 'qicharts', 'testthat'
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.23
Check: examples
Result: ERROR
Running examples in ‘agridat-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: connolly.potato
> ### Title: Potato yields in single-drill plots
> ### Aliases: connolly.potato
> ### Keywords: datasets
>
> ### ** Examples
>
>
> library(agridat)
> data(connolly.potato)
> dat <- connolly.potato
>
> # Field plan
> libs(desplot)
Installing package into ‘/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d’
(as ‘lib’ is unspecified)
also installing the dependencies ‘utf8’, ‘farver’, ‘labeling’, ‘munsell’, ‘fansi’, ‘pillar’, ‘pkgconfig’, ‘stringi’, ‘gtable’, ‘isoband’, ‘scales’, ‘tibble’, ‘vctrs’, ‘withr’, ‘plyr’, ‘stringr’, ‘ggplot2’, ‘reshape2’
* installing *source* package ‘utf8’ ...
** package ‘utf8’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpvuyeZw/R.INSTALL161de75b8f44d4/utf8/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c as_utf8.c -o as_utf8.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bytes.c -o bytes.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c context.c -o context.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c render.c -o render.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c render_table.c -o render_table.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c string.c -o string.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c text.c -o text.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8_encode.c -o utf8_encode.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8_format.c -o utf8_format.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8_normalize.c -o utf8_normalize.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8_valid.c -o utf8_valid.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8_width.c -o utf8_width.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c util.c -o util.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/array.c -o utf8lite/src/array.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/char.c -o utf8lite/src/char.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/encode.c -o utf8lite/src/encode.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/error.c -o utf8lite/src/error.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/escape.c -o utf8lite/src/escape.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/graph.c -o utf8lite/src/graph.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/render.c -o utf8lite/src/render.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/text.c -o utf8lite/src/text.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o
ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpvuyeZw/R.INSTALL161de75b8f44d4/utf8/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpvuyeZw/R.INSTALL161de75b8f44d4/utf8/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpvuyeZw/R.INSTALL161de75b8f44d4/utf8/src'
installing to /home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/00LOCK-utf8/00new/utf8/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (utf8)
* installing *source* package ‘farver’ ...
** package ‘farver’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuEQxQ3/R.INSTALL16408f2c855cd5/farver/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ColorSpace.cpp -o ColorSpace.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Comparison.cpp -o Comparison.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Conversion.cpp -o Conversion.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c encode.cpp -o encode.o
encode.cpp: In function ‘int double2int(double)’:
encode.cpp:22:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
22 | return reinterpret_cast<int&>(d);
| ^
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c farver.cpp -o farver.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o farver.so ColorSpace.o Comparison.o Conversion.o encode.o farver.o init.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuEQxQ3/R.INSTALL16408f2c855cd5/farver/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuEQxQ3/R.INSTALL16408f2c855cd5/farver/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuEQxQ3/R.INSTALL16408f2c855cd5/farver/src'
installing to /home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/00LOCK-farver/00new/farver/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (farver)
* installing *source* package ‘labeling’ ...
** package ‘labeling’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (labeling)
* installing *source* package ‘munsell’ ...
** package ‘munsell’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (munsell)
* installing *source* package ‘fansi’ ...
** package ‘fansi’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFdSB7M/R.INSTALL16eeb366f10f7a/fansi/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assumptions.c -o assumptions.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c carry.c -o carry.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c has.c -o has.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nchar.c -o nchar.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c normalize.c -o normalize.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c read.c -o read.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rnchar.c -o rnchar.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c state.c -o state.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c strip.c -o strip.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c substr.c -o substr.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tabs.c -o tabs.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tohtml.c -o tohtml.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c trimws.c -o trimws.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c unhandled.c -o unhandled.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utf8.c -o utf8.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wrap.c -o wrap.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c write.c -o write.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o fansi.so assumptions.o carry.o has.o init.o nchar.o normalize.o read.o rnchar.o state.o strip.o substr.o tabs.o tohtml.o trimws.o unhandled.o utf8.o utils.o wrap.o write.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFdSB7M/R.INSTALL16eeb366f10f7a/fansi/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFdSB7M/R.INSTALL16eeb366f10f7a/fansi/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFdSB7M/R.INSTALL16eeb366f10f7a/fansi/src'
installing to /home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/00LOCK-fansi/00new/fansi/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fansi)
* installing *source* package ‘pkgconfig’ ...
** package ‘pkgconfig’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (pkgconfig)
* installing *source* package ‘stringi’ ...
** package ‘stringi’ successfully unpacked and MD5 sums checked
** using staged installation
checking for R_HOME... /home/hornik/tmp/R.check/r-devel-gcc/Work/build
checking for R... /home/hornik/tmp/R.check/r-devel-gcc/Work/build/bin/R
checking for endianness... little
checking for cat... /usr/bin/cat
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C++... yes
checking whether g++-13 -std=gnu++17 accepts -g... yes
checking for g++-13 -std=gnu++17 option to enable C++11 features... none needed
checking whether the C++ compiler supports the 'long long' type... yes
checking whether the compiler implements namespaces... yes
checking whether the compiler supports the Standard Template Library... yes
checking whether std::map is available... yes
checking for pkg-config... /usr/bin/pkg-config
checking with 'pkg-config' for the system ICU4C (icu-i18n icu-uc)... 72.1
checking for ICU4C >= 61... yes
checking for additional CPPFLAGS, LDFLAGS, and LIBS required... done
checking whether an ICU4C-based project can be built... yes
checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes
checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes
checking the capabilities of the ICU data library (ucol)... yes
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for elf.h... yes
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating src/uconfig_local.h
config.status: creating src/install.libs.R
*** stringi configure summary:
ICU_FOUND=1
STRINGI_CXXSTD=
STRINGI_CXXFLAGS= -fpic
STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H
STRINGI_LDFLAGS= -L/usr/lib/x86_64-linux-gnu
STRINGI_LIBS= -licui18n -licuuc -licudata
*** Compiler settings used:
CXX=g++-13 -std=gnu++17
LD=g++-13 -std=gnu++17
CXXFLAGS=-g -O2 -Wall -pedantic -mtune=native
CPPFLAGS=-I/usr/local/include
LDFLAGS=
LIBS=
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzAkhCc/R.INSTALL171927571d1983/stringi/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_brkiter.cpp -o stri_brkiter.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_collator.cpp -o stri_collator.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_common.cpp -o stri_common.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_compare.cpp -o stri_compare.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_base.cpp -o stri_container_base.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_listint.cpp -o stri_container_listint.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_listraw.cpp -o stri_container_listraw.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_listutf8.cpp -o stri_container_listutf8.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_regex.cpp -o stri_container_regex.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_usearch.cpp -o stri_container_usearch.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_utf16.cpp -o stri_container_utf16.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_utf8.cpp -o stri_container_utf8.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_encoding_detection.cpp -o stri_encoding_detection.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_encoding_management.cpp -o stri_encoding_management.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_escape.cpp -o stri_escape.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_exception.cpp -o stri_exception.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_ICU_settings.cpp -o stri_ICU_settings.o
In file included from stri_ICU_settings.cpp:37:
uconfig_local.h:42: warning: "UCONFIG_USE_WINDOWS_LCID_MAPPING_API" redefined
42 | #define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 0
|
In file included from /usr/include/unicode/platform.h:24,
from /usr/include/unicode/ptypes.h:52,
from stri_external.h:52,
from stri_stringi.h:36,
from stri_ICU_settings.cpp:33:
/usr/include/unicode/uconfig.h:381: note: this is the location of the previous definition
381 | # define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 1
|
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_join.cpp -o stri_join.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_length.cpp -o stri_length.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_pad.cpp -o stri_pad.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_prepare_arg.cpp -o stri_prepare_arg.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_random.cpp -o stri_random.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_reverse.cpp -o stri_reverse.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_class_count.cpp -o stri_search_class_count.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_class_detect.cpp -o stri_search_class_detect.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_class_extract.cpp -o stri_search_class_extract.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_class_locate.cpp -o stri_search_class_locate.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_class_replace.cpp -o stri_search_class_replace.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_class_split.cpp -o stri_search_class_split.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_class_subset.cpp -o stri_search_class_subset.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_class_trim.cpp -o stri_search_class_trim.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_common.cpp -o stri_search_common.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_coll_count.cpp -o stri_search_coll_count.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_coll_split.cpp -o stri_search_coll_split.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_in.cpp -o stri_search_in.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_other_split.cpp -o stri_search_other_split.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_regex_count.cpp -o stri_search_regex_count.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_regex_match.cpp -o stri_search_regex_match.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_regex_split.cpp -o stri_search_regex_split.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_sort.cpp -o stri_sort.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_sprintf.cpp -o stri_sprintf.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_stats.cpp -o stri_stats.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_string8.cpp -o stri_string8.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_stringi.cpp -o stri_stringi.o
In file included from stri_stringi.cpp:39:
uconfig_local.h:42: warning: "UCONFIG_USE_WINDOWS_LCID_MAPPING_API" redefined
42 | #define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 0
|
In file included from /usr/include/unicode/platform.h:24,
from /usr/include/unicode/ptypes.h:52,
from stri_external.h:52,
from stri_stringi.h:36,
from stri_stringi.cpp:33:
/usr/include/unicode/uconfig.h:381: note: this is the location of the previous definition
381 | # define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 1
|
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_sub.cpp -o stri_sub.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_test.cpp -o stri_test.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_time_zone.cpp -o stri_time_zone.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_time_calendar.cpp -o stri_time_calendar.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_time_symbols.cpp -o stri_time_symbols.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_time_format.cpp -o stri_time_format.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_trans_casemap.cpp -o stri_trans_casemap.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_trans_other.cpp -o stri_trans_other.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_trans_normalization.cpp -o stri_trans_normalization.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_ucnv.cpp -o stri_ucnv.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_uloc.cpp -o stri_uloc.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_utils.cpp -o stri_utils.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c stri_wrap.cpp -o stri_wrap.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_sprintf.o stri_stats.o stri_string8.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzAkhCc/R.INSTALL171927571d1983/stringi/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzAkhCc/R.INSTALL171927571d1983/stringi/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzAkhCc/R.INSTALL171927571d1983/stringi/src'
installing via 'install.libs.R' to /home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/00LOCK-stringi/00new/stringi
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (stringi)
* installing *source* package ‘gtable’ ...
** package ‘gtable’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (gtable)
* installing *source* package ‘isoband’ ...
** package ‘isoband’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-25) 13.2.0’
using C++11
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjgqbYW/R.INSTALL193aa225c205d7/isoband/src'
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c clip-lines.cpp -o clip-lines.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c isoband.cpp -o isoband.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c polygon.cpp -o polygon.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c separate-polygons.cpp -o separate-polygons.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c test-clip-lines.cpp -o test-clip-lines.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c test-runner.cpp -o test-runner.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c test-separate-polygons.cpp -o test-separate-polygons.o
g++-13 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o isoband.so clip-lines.o init.o isoband.o polygon.o separate-polygons.o test-clip-lines.o test-runner.o test-separate-polygons.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjgqbYW/R.INSTALL193aa225c205d7/isoband/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjgqbYW/R.INSTALL193aa225c205d7/isoband/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjgqbYW/R.INSTALL193aa225c205d7/isoband/src'
installing to /home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/00LOCK-isoband/00new/isoband/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (isoband)
* installing *source* package ‘vctrs’ ...
** package ‘vctrs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpfb0h14/R.INSTALL1960494ec2d75d/vctrs/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c altrep-lazy-character.c -o altrep-lazy-character.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c altrep-rle.c -o altrep-rle.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c altrep.c -o altrep.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c arg-counter.c -o arg-counter.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c arg.c -o arg.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assert.c -o assert.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bind.c -o bind.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c-unchop.c -o c-unchop.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c.c -o c.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c callables.c -o callables.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cast-bare.c -o cast-bare.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cast-dispatch.c -o cast-dispatch.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cast.c -o cast.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c compare.c -o compare.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c complete.c -o complete.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c conditions.c -o conditions.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dictionary.c -o dictionary.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dim.c -o dim.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c empty.c -o empty.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equal.c -o equal.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c expand.c -o expand.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fields.c -o fields.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fill.c -o fill.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c globals.c -o globals.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c group.c -o group.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c growable.c -o growable.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hash.c -o hash.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c interval.c -o interval.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c match-joint.c -o match-joint.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c match.c -o match.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c missing.c -o missing.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c names.c -o names.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order-collate.c -o order-collate.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order-groups.c -o order-groups.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order-sortedness.c -o order-sortedness.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order-truelength.c -o order-truelength.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order.c -o order.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c poly-op.c -o poly-op.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c proxy-restore.c -o proxy-restore.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c proxy.c -o proxy.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ptype-common.c -o ptype-common.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ptype.c -o ptype.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ptype2-dispatch.c -o ptype2-dispatch.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ptype2.c -o ptype2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rank.c -o rank.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rep.c -o rep.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rlang-dev.c -o rlang-dev.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rlang.c -o rlang.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c runs.c -o runs.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c set.c -o set.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shape.c -o shape.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c size-common.c -o size-common.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c size.c -o size.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-array.c -o slice-array.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-assign-array.c -o slice-assign-array.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-assign.c -o slice-assign.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-chop.c -o slice-chop.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-interleave.c -o slice-interleave.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice.c -o slice.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c split.c -o split.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c subscript-loc.c -o subscript-loc.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c subscript.c -o subscript.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c translate.c -o translate.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-data-frame.c -o type-data-frame.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-date-time.c -o type-date-time.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-factor.c -o type-factor.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-info.c -o type-info.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-integer64.c -o type-integer64.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-tibble.c -o type-tibble.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c typeof2-s3.c -o typeof2-s3.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c typeof2.c -o typeof2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c unspecified.c -o unspecified.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils-dispatch.c -o utils-dispatch.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vctrs-core.c -o vctrs-core.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I./rlang -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c version.c -o version.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o vctrs.so altrep-lazy-character.o altrep-rle.o altrep.o arg-counter.o arg.o assert.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o empty.o equal.o expand.o fields.o fill.o globals.o group.o growable.o hash.o init.o interval.o match-joint.o match.o missing.o names.o order-collate.o order-groups.o order-sortedness.o order-truelength.o order.o poly-op.o proxy-restore.o proxy.o ptype-common.o ptype.o ptype2-dispatch.o ptype2.o rank.o rep.o rlang-dev.o rlang.o runs.o set.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice-interleave.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-integer64.o type-tibble.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils.o vctrs-core.o version.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpfb0h14/R.INSTALL1960494ec2d75d/vctrs/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpfb0h14/R.INSTALL1960494ec2d75d/vctrs/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpfb0h14/R.INSTALL1960494ec2d75d/vctrs/src'
installing to /home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/00LOCK-vctrs/00new/vctrs/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Error in as.list.environment(base::getNamespace("vctrs"), all.names = TRUE) :
cannot return a promise (PROMSXP) object
Calls: <Anonymous> ... withCallingHandlers -> <Anonymous> -> <Anonymous> -> as.list.environment
Execution halted
ERROR: loading failed
* removing ‘/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/vctrs’
Warning in install.packages(p) :
installation of package ‘vctrs’ had non-zero exit status
* installing *source* package ‘withr’ ...
** package ‘withr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (withr)
* installing *source* package ‘plyr’ ...
** package ‘plyr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-25) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPaqNTl/R.INSTALL1a24f51ee05f80/plyr/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c loop_apply.c -o loop_apply.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c split-numeric.cpp -o split-numeric.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPaqNTl/R.INSTALL1a24f51ee05f80/plyr/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPaqNTl/R.INSTALL1a24f51ee05f80/plyr/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPaqNTl/R.INSTALL1a24f51ee05f80/plyr/src'
installing to /home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/00LOCK-plyr/00new/plyr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (plyr)
ERROR: dependency ‘vctrs’ is not available for package ‘pillar’
* removing ‘/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/pillar’
Warning in install.packages(p) :
installation of package ‘pillar’ had non-zero exit status
* installing *source* package ‘scales’ ...
** package ‘scales’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (scales)
ERROR: dependency ‘vctrs’ is not available for package ‘stringr’
* removing ‘/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/stringr’
Warning in install.packages(p) :
installation of package ‘stringr’ had non-zero exit status
ERROR: dependencies ‘pillar’, ‘vctrs’ are not available for package ‘tibble’
* removing ‘/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/tibble’
Warning in install.packages(p) :
installation of package ‘tibble’ had non-zero exit status
ERROR: dependency ‘stringr’ is not available for package ‘reshape2’
* removing ‘/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/reshape2’
Warning in install.packages(p) :
installation of package ‘reshape2’ had non-zero exit status
ERROR: dependencies ‘tibble’, ‘vctrs’ are not available for package ‘ggplot2’
* removing ‘/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/ggplot2’
Warning in install.packages(p) :
installation of package ‘ggplot2’ had non-zero exit status
ERROR: dependencies ‘ggplot2’, ‘reshape2’ are not available for package ‘desplot’
* removing ‘/home/hornik/tmp/scratch/Rtmpho6IsT/RLIBS_1579522c260c9d/desplot’
Warning in install.packages(p) :
installation of package ‘desplot’ had non-zero exit status
Error in library(p, character.only = TRUE) :
there is no package called ‘desplot’
Calls: libs -> library
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.23
Check: tests
Result: ERROR
Running ‘testthat.R’ [0s/1s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
Error in library(testthat) : there is no package called 'testthat'
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.23
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘agridat_data.Rmd’ using rmarkdown
--- finished re-building ‘agridat_data.Rmd’
--- re-building ‘agridat_graphical_gems.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/agridat.Rcheck/vign_test/agridat/vignettes/agridat_graphical_gems_files/figure-html/lee2-1.png
480x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 80131 bytes
Input file size = 80317 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65311
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65311
Output IDAT size = 65311 bytes (14820 bytes decrease)
Output file size = 65389 bytes (14928 bytes = 18.59% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/agridat.Rcheck/vign_test/agridat/vignettes/agridat_graphical_gems_files/figure-html/harrison-1.png
480x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32230 bytes
Input file size = 32344 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25229
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25229
Output IDAT size = 25229 bytes (7001 bytes decrease)
Output file size = 25307 bytes (7037 bytes = 21.76% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/agridat.Rcheck/vign_test/agridat/vignettes/agridat_graphical_gems_files/figure-html/mead-1.png
480x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 36717 bytes
Input file size = 36843 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29085
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29085
Output IDAT size = 29085 bytes (7632 bytes decrease)
Output file size = 29163 bytes (7680 bytes = 20.85% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/agridat.Rcheck/vign_test/agridat/vignettes/agridat_graphical_gems_files/figure-html/keen-1.png
672x720 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 85289 bytes
Input file size = 85487 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65985
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65985
Output IDAT size = 65985 bytes (19304 bytes decrease)
Output file size = 66063 bytes (19424 bytes = 22.72% decrease)
Quitting from lines 291-338 [wright] (agridat_graphical_gems.Rmd)
Error: processing vignette 'agridat_graphical_gems.Rmd' failed with diagnostics:
there is no package called 'reshape2'
--- failed re-building ‘agridat_graphical_gems.Rmd’
--- re-building ‘agridat_intro.Rmd’ using rmarkdown
--- finished re-building ‘agridat_intro.Rmd’
--- re-building ‘agridat_uniformity_data.Rmd’ using rmarkdown
--- finished re-building ‘agridat_uniformity_data.Rmd’
SUMMARY: processing the following file failed:
‘agridat_graphical_gems.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc