Last updated on 2024-06-14 00:53:44 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 7.3.1 | 28.02 | 433.51 | 461.53 | OK | |
| r-devel-linux-x86_64-debian-gcc | 7.3.1 | 19.79 | 166.46 | 186.25 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 7.3.1 | 556.06 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 7.3.1 | 553.57 | OK | |||
| r-devel-windows-x86_64 | 7.3.1 | 26.00 | 329.00 | 355.00 | OK | |
| r-patched-linux-x86_64 | 7.3.1 | 31.44 | 421.33 | 452.77 | OK | |
| r-release-linux-x86_64 | 7.3.1 | 24.32 | 408.22 | 432.54 | OK | |
| r-release-macos-arm64 | 7.3.1 | 138.00 | NOTE | |||
| r-release-macos-x86_64 | 7.3.1 | 231.00 | NOTE | |||
| r-release-windows-x86_64 | 7.3.1 | 25.00 | 328.00 | 353.00 | OK | |
| r-oldrel-macos-arm64 | 7.3.1 | 140.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 7.3.1 | 370.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 7.3.1 | 33.00 | 408.00 | 441.00 | OK |
Version: 7.3.1
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'ggplot2', 'testthat'
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 7.3.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘A_Haplin_intro_installation.Rmd’ using rmarkdown
--- finished re-building ‘A_Haplin_intro_installation.Rmd’
--- re-building ‘B_Reading_data.Rmd’ using rmarkdown
Read 6 items
Read 1494 items
Read 0 items
Read 864 items
Read 1433376 items
Read 0 items
Read 6 items
Read 1494 items
Read 0 items
Read 864 items
Read 1433376 items
Read 0 items
--- finished re-building ‘B_Reading_data.Rmd’
--- re-building ‘C_Running_Haplin.Rmd’ using rmarkdown
Read 6 items
Read 1494 items
Read 0 items
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Haplin.Rcheck/vign_test/Haplin/vignettes/C_Running_Haplin_files/figure-html/haplinfig1-1.png
576x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 14494 bytes
Input file size = 15364 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13175
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 13132
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 13132
Output IDAT size = 13132 bytes (1362 bytes decrease)
Output file size = 13210 bytes (2154 bytes = 14.02% decrease)
Read 8 items
Read 9112 items
Read 0 items
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Haplin.Rcheck/vign_test/Haplin/vignettes/C_Running_Haplin_files/figure-html/haplinfig2-1.png
576x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 11299 bytes
Input file size = 12169 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10171
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10171
Output IDAT size = 10171 bytes (1128 bytes decrease)
Output file size = 10249 bytes (1920 bytes = 15.78% decrease)
Read 864 items
Read 1433376 items
Read 0 items
Quitting from lines 150-151 [plot_p_val] (C_Running_Haplin.Rmd)
Error: processing vignette 'C_Running_Haplin.Rmd' failed with diagnostics:
ggplot2 cannot be loaded!
--- failed re-building ‘C_Running_Haplin.Rmd’
--- re-building ‘D_Running_Haplin_on_cluster.Rmd’ using rmarkdown
--- finished re-building ‘D_Running_Haplin_on_cluster.Rmd’
--- re-building ‘E_hapRelEff.Rmd’ using rmarkdown
--- finished re-building ‘E_hapRelEff.Rmd’
SUMMARY: processing the following file failed:
‘C_Running_Haplin.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 7.3.1
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘Rmpi’
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64