Companion to R for Plant Disease Epidemiology Book
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Documentation for package ‘r4pde’ version 0.1.0
Help Pages
| AFSD | Analysis of foci structure and dynamics (AFSD) |
| BlastWheat | BlastWheat dataset |
| BPL | Binary Power Law Analysis for Spatial Disease Patterns |
| BudBlightSoybean | BudBlightSoybean dataset |
| CompMuCens | Survival analysis for quantitative ordinal scale data. |
| count_subareas | Count the Number of Ones in Subareas of a Matrix |
| count_subareas_random | Random Subgrid Sampling of a Binary Matrix |
| DidymellaWatermelon | DidymellaWatermelon dataset |
| DSI | Calculate the Disease Severity Index (DSI) (class for each unit) |
| DSI2 | Calculate the Disease severity Index (DSI) (frequency of each class) |
| FHBWheat | FHBWheat dataset |
| fit_gradients | Fit Gradient Models to Data |
| FusariumBanana | FusariumBanana dataset |
| get_nasapower | Fetch NASA POWER Data for Multiple Locations with a Progress Bar |
| join_count | Test for Spatial Join Count Statistics |
| oruns_test | Runs Test |
| oruns_test_boustrophedon | Boustrophedon Run Test for Binary Matrix |
| oruns_test_byrowcol | Runs Test for Each Row and Column of a Binary Matrix |
| plot_AFSD | Plot ASFD |
| RustSoybean | RustSoybean dataset |
| SpatialAggregated | SpatialAggregated dataset |
| SpatialRandom | SpatialRandom dataset |
| theme_r4pde | Custom ggplot2 theme based on cowplot::theme_half_open |
| WhiteMoldSoybean | WhiteMoldSoybean dataset |
| windowpane | Window Pane for Epidemiological Analysis |
| windowpane_tests | Windowpane Tests for Correlation Analysis |