Tools for Regression Using Pre-Computed Summary Statistics

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Documentation for package ‘pcsstools’ version 0.1.1

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anova.pcsslm ANOVA for linear models fit using PCSS
anova.pcsslmlist ANOVA for linear models fit using PCSS
approx_and Approximate a linear model for a series of logical AND statements
approx_conditional Approximate the mean of Y conditional on X
approx_mult_prod Approximate the covariance of a set of predictors and a product of responses
approx_or Approximate a linear model for a series of logical OR statements
approx_prod_stats Approximate summary statistics for a product of phenotypes and a set of predictors
approx_response_cov_recursive Approximate the covariance of one response with an arbitrary product of responses.
calculate_lm Calculate a linear model using PCSS
calculate_lm_combo Calculate a linear model for a linear combination of responses
check_terms Check that independent and dependent variables are accounted for through PCSS
extract_predictors Extract independent variables from a formula
extract_response Extract dependent variables from a formula as a string
get_pcor Approximate the partial correlation of Y and Z given X
guess_response Guess the function that is applied to a set of responses
make_permutations List all permutations of a sequence of integers
model_and Approximate a linear model for a series of logical AND statements using PCSS
model_combo Model a linear combination of a set of phenotypes using PCSS
model_or Approximate a linear model for a series of logical OR statements using PCSS
model_prcomp Model the principal component score of a set of phenotypes using PCSS
model_product Approximate a linear model for a product using PCSS
model_singular Model an individual phenotype using PCSS
new_predictor Create an object of class "predictor"
new_predictor_binary Shortcut to create a predictor object for a binary variable
new_predictor_normal Shortcut to create a predictor object for a continuous variable
new_predictor_snp Shortcut to create a predictor object for a SNP's minor allele counts
pcsslm Approximate a linear model using PCSS
pcsstools pcsstools: Tools for Regression Using Pre-Computed Summary Statistics
pcsstools_example Simulated example data
print.pcsslm Print an object of class pcsslm