B C D E F G H I J M N P R S T U W
| gMCP-package | Graphical described Multiple Comparison Procedures |
| BauerEtAl2001 | Functions that create different example graphs |
| bdiagNA | Create a Block Diagonal Matrix with NA outside the diagonal |
| bonferroni.test | Weighted Bonferroni-test |
| bonferroni.trimmed.simes.test | Trimmed Simes test for intersections of two hypotheses and otherwise weighted Bonferroni-test |
| BonferroniHolm | Functions that create different example graphs |
| BretzEtAl2009a | Functions that create different example graphs |
| BretzEtAl2009b | Functions that create different example graphs |
| BretzEtAl2009c | Functions that create different example graphs |
| BretzEtAl2011 | Functions that create different example graphs |
| calcPower | Calculate power values |
| corMatWizard | Graphical User Interface for the creation of correlation matrices |
| cycleGraph | Functions that create different example graphs |
| doInterim | EXPERIMENTAL: Evaluate conditional errors at interim for a pre-planned graphical procedure |
| edgeAttr | Class graphMCP |
| edgeAttr-method | Class graphMCP |
| edgeAttr<- | Class graphMCP |
| edgeAttr<--method | Class graphMCP |
| Entangled1Maurer2012 | Functions that create different example graphs |
| Entangled2Maurer2012 | Functions that create different example graphs |
| entangledMCP | Class entangledMCP |
| entangledMCP-class | Class entangledMCP |
| exampleGraphs | Functions that create different example graphs |
| extractPower | Calculate power values |
| fallback | Functions that create different example graphs |
| Ferber2011 | Functions that create different example graphs |
| FerberTimeDose2011 | Functions that create different example graphs |
| fixedSequence | Functions that create different example graphs |
| generalSuccessive | Functions that create different example graphs |
| generateBounds | generateBounds |
| generatePvals | generatePvals |
| generateTest | generateTest |
| generateWeights | generateWeights |
| getJavaInfo | Get Memory and Runtime Info from JVM |
| getMatrices | Class entangledMCP |
| getMatrices-method | Class entangledMCP |
| getMatrix | Class graphMCP |
| getMatrix-method | Class graphMCP |
| getNodes | Class graphMCP |
| getNodes-method | Class entangledMCP |
| getNodes-method | Class graphMCP |
| getRejected | Class graphMCP |
| getRejected-method | Class entangledMCP |
| getRejected-method | Class gMCPResult |
| getRejected-method | Class gPADInterim |
| getRejected-method | Class graphMCP |
| getWeights | Class graphMCP |
| getWeights-method | Class entangledMCP |
| getWeights-method | Class gMCPResult |
| getWeights-method | Class gPADInterim |
| getWeights-method | Class graphMCP |
| getXCoordinates | Class graphMCP |
| getXCoordinates-method | Class entangledMCP |
| getXCoordinates-method | Class graphMCP |
| getYCoordinates | Class graphMCP |
| getYCoordinates-method | Class entangledMCP |
| getYCoordinates-method | Class graphMCP |
| gMCP | Graph based Multiple Comparison Procedures |
| gMCP.extended | Graph based Multiple Comparison Procedures |
| gMCPReport | Automatic Generation of gMCP Reports |
| gMCPResult | Class gMCPResult |
| gMCPResult-class | Class gMCPResult |
| gPADInterim | Class gPADInterim |
| gPADInterim-class | Class gPADInterim |
| graph2latex | Graph2LaTeX |
| graph2matrix | Matrix2Graph and Graph2Matrix |
| graphAnalysis | Analysis of a gMCP-Graph |
| graphGUI | Graphical User Interface for graphical described multiple comparison procedures |
| graphMCP | Class graphMCP |
| graphMCP-class | Class graphMCP |
| graphTest | Multiple testing using graphs |
| HommelEtAl2007 | Functions that create different example graphs |
| HommelEtAl2007Simple | Functions that create different example graphs |
| HungEtWang2010 | Functions that create different example graphs |
| HuqueAloshEtBhore2011 | Functions that create different example graphs |
| hydroquinone | Hydroquinone Mutagenicity Assay |
| improvedFallbackI | Functions that create different example graphs |
| improvedFallbackII | Functions that create different example graphs |
| improvedParallelGatekeeping | Functions that create different example graphs |
| joinGraphs | Joins two graphMCP objects |
| matrix2graph | Matrix2Graph and Graph2Matrix |
| MaurerEtAl1995 | Functions that create different example graphs |
| nodeAttr | Class graphMCP |
| nodeAttr-method | Class graphMCP |
| nodeAttr<- | Class graphMCP |
| nodeAttr<--method | Class graphMCP |
| parallelGatekeeping | Functions that create different example graphs |
| parametric.test | Weighted parametric test |
| placeNodes | Placement of graph nodes |
| plot-method | Class gMCPResult |
| plot-method | Class gPADInterim |
| plot-method | Class graphMCP |
| plotSimCI | Plot confidence intervals |
| print-method | Class entangledMCP |
| print-method | Class gMCPResult |
| print-method | Class gPADInterim |
| print-method | Class graphMCP |
| rejectNode | Rejects a node/hypothesis and updates the graph accordingly. |
| replaceVariables | Replaces variables in a general graph with specified numeric values |
| rqmvnorm | Random sample from the multivariate normal distribution |
| sampSize | Sample size calculations |
| sampSizeCore | Function for sample size calculation |
| secondStageTest | EXPERIMENTAL: Construct a valid level alpha test for the second stage of an adaptive design that is based on a pre-planned graphical MCP |
| setEdge | Class graphMCP |
| setEdge-method | Class graphMCP |
| setRejected<- | Class graphMCP |
| setRejected<--method | Class graphMCP |
| setWeights | Class graphMCP |
| setWeights-method | Class graphMCP |
| simConfint | Simultaneous confidence intervals for sequentially rejective multiple test procedures |
| simConfint-method | Simultaneous confidence intervals for sequentially rejective multiple test procedures |
| simes.on.subsets.test | Simes on subsets, otherwise Bonferroni |
| simes.test | Weighted Simes test |
| simpleSuccessiveI | Functions that create different example graphs |
| simpleSuccessiveII | Functions that create different example graphs |
| simvastatin | Simvastatin and Colesevelam Treatment in Patients with Primary Hypercholesterolemia |
| subgraph | Get a subgraph |
| substituteEps | Substitute Epsilon |
| truncatedHolm | Functions that create different example graphs |
| unitTestsGMCP | Run the R unit (and optional the JUnit) test suite for gMCP |
| WangTing2014 | Functions that create different example graphs |
| weighted.test.functions | Weighted Test Functions for use with gMCP |