Versatile Functions for Working with Pedigrees

Documentation for package ‘pedigreeTools’ version 0.1

Dmat	Diagonal of D in the A = TDT' factorization.
editPed	Edits a disordered or incomplete pedigree.
getA	Additive Relationship Matrix
getAInv	Inverse of the Relationship Matrix
getASelfing	Extends the pedigree according to number of selfing cycles and also optionally computes the Additive Relationship Matrix for that pedigree.
getGenAncestors	Counts number of generations of ancestors for one subject. Use recursion.
inbreeding	Inbreeding coefficients from a pedigree
ped2DF	Convert a pedigree to a data frame
pedigree	Constructor for pedigree objects
pedigree-class	Pedigree class
prunePed	Subsets a pedigree for a specified vector of individuals upto a specified number of previous generations using Recursion.
relfactor	Relationship factor from a pedigree