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| bin_env | Helper function to prepare bin tables |
| bin_ml_rec | Maximum likelihood reconstruction of ancestral character states |
| bin_par_rec | Maximum parsimony reconstruction of ancestral character states |
| bin_table | Bin table of environmental conditions in M and for occurrences |
| bin_tables | Bin tables of environmental conditions in M and for occurrences from objects |
| bin_tables0 | Bin tables of environmental conditions in M and for occurrences from data |
| character_table | Example of character table for six species |
| histograms_env | Histograms of environmental conditions in M and for occurrences |
| hist_evalues | Histograms of environmental conditions in M and for occurrences (one species) |
| make_9blocks | Helper function to split geographic points in 9 blocks of equal size |
| m_list | Example of accessible areas for six species |
| nichevol | nichevol: Assessment of Species’ Ecological Niche Evolution Considering Uncertainty in Reconstructions |
| nichevol_bars | PNG bar figures for representing niche evolution |
| nichevol_labels | Labels to represent changes of niche characteristics between ancestors and descendants |
| nichevol_legend | Legends for niche evolution labels in phylogenetic trees |
| niche_bars | PNG bar figures to represent ecological niches of distinct taxa |
| niche_labels | Labels to represent niches of tips and ancestors |
| niche_legend | Legends for niche labels in phylogenetic trees |
| occ_list | Example of occurrence records for six species |
| pdf_histograms | Helper function to create PDF files with histograms |
| random_polygons | Generation of random polygons in a given area |
| rename_tips | Helper function to rename tips of trees for simulations |
| rformat_type | Helper function to find raster extension |
| score_tip | Helper function to calculate the median bin score for a given species |
| score_tree | Helper function to assign bin scores to every tip in a given tree |
| sig_sq | Helper function to get sigma squared values for a given dataset |
| smooth_rec | Smooth character table values resulted from ancestral character state reconstructions |
| stats_eval | Statistics of environmental conditions in M and for occurrences (one variable) |
| stats_evalues | Statistics of environmental conditions in M and for occurrences (multiple variables) |
| tree | Example of a phylogenetic tree for six species |
| tree5 | Example of a phylogenetic tree for five species |
| tree_data | Example of a list containing a tree and a table of characters for six species |