| cornet | Correlation network |
| gennet | General Regression network |
| get.common.networks | Method for Function 'get.common.networks' |
| get.common.networks,pairOfNetworks | Method for Function 'get.common.networks' |
| get.common.networks-method | Class '"pairOfNetworks"' |
| get.common.networks-modules | Method for Function 'get.common.networks' |
| get.modules | Methods for Function 'get.modules' |
| get.modules,modules | Methods for Function 'get.modules' |
| get.modules-method | Class '"modules"' |
| get.modules-methods | Methods for Function 'get.modules' |
| get.network1 | Method for Function 'get.network1' |
| get.network1,pairOfNetworks | Method for Function 'get.network1' |
| get.network1-method | Class '"pairOfNetworks"' |
| get.network1-methods | Method for Function 'get.network1' |
| get.network2 | Method for Function 'get.network2' |
| get.network2,pairOfNetworks | Method for Function 'get.network2' |
| get.network2-method | Class '"pairOfNetworks"' |
| get.network2-methods | Method for Function 'get.network2' |
| get.results | Method for Function 'get.results' |
| get.results,resultsClassTest | Method for Function 'get.results' |
| get.results,resultsIndTest | Method for Function 'get.results' |
| get.results,resultsModTest | Method for Function 'get.results' |
| get.results-method | Class '"resultsClassTest"' |
| get.results-method | Class '"resultsIndTest"' |
| get.results-method | Class '"resultsModTest"' |
| get.results-methods | Method for Function 'get.results' |
| HeavyMice | Heavy Mice Dataset. |
| LeanMice | Lean Mice Dataset. |
| modules-class | Class '"modules"' |
| network.modules | Determine modules for network |
| pairOfNetworks-class | Class '"pairOfNetworks"' |
| PCnet | Principal Components network |
| PLSnet | Partial Least Squares network |
| resultsClassTest-class | Class '"resultsClassTest"' |
| resultsIndTest-class | Class '"resultsIndTest"' |
| resultsModTest-class | Class '"resultsModTest"' |
| RRnet | Ridge Regression network |
| show-method | Class '"modules"' |
| show-method | Class '"pairOfNetworks"' |
| show-method | Class '"resultsClassTest"' |
| show-method | Class '"resultsIndTest"' |
| show-method | Class '"resultsModTest"' |
| summary | Methods for Function 'summary' |
| summary,modules | Methods for Function 'summary' |
| summary,resultsIndTest | Methods for Function 'summary' |
| summary,resultsModTest | Methods for Function 'summary' |
| summary-method | Class '"modules"' |
| summary-method | Class '"resultsIndTest"' |
| summary-method | Class '"resultsModTest"' |
| summary-methods | Methods for Function 'summary' |
| test.class.genes | Test for differential connectivity of a class of genes |
| test.individual.genes | Test for differential connectivity of individual genes |
| test.modular.structure | Test for differential modular structures |