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| as | S4 class for disco |
| corOrt | Calculate ortholog gene correlation coefficients |
| disco.score | Calculate concordance score for differentially expressed genes in two data sets |
| makeMatchedOrtholog | Create an object of class matchedOrtholog |
| makeSummary | Common modules in specified comparisons |
| matchedOrtholog-class | S4 class for disco |
| modCor | Calculate correlation between regulation of orthologous genes in a chosen gene set |
| orthologs | Example ortholog data set |
| percentGenes | Calculates percentage of present genes from a specified superset of expression modules |
| plotDisco | plots log2FC of the corresponding genes against each other |
| show-method | S4 class for disco |