| IsoGene-package | IsoGene |
| dopamine | Dose-response microarray example data |
| exampleData | Dose-response microarray example data |
| Isoallfdr | Obtaining the delta table in the SAM procedure |
| IsoBHPlot | Plot of adjusted p-values using BH or BY adjustment |
| Isofudge | Calculation of the fudge factor for the five SAM test statistics in the SAM procedure |
| IsoGene | IsoGene |
| IsoGene1 | The five test statistics calculated for both the increasing and decreasing trends |
| IsoGenem | The five test statistics calculated for both the increasing and decreasing trends |
| IsoGenemSAM | The five SAM test statistics calculated for both the increasing and decreasing trends |
| IsomaxT | The maxT procedure for order restricted inference |
| IsoPlot | IsoPlot |
| IsopvaluePlot | Plot of p-values from permutations under increasing or decreasing alternatives |
| Isoqqstat | Implementation of five SAM test statistics in the SAM procedure |
| Isoqval | Obtaining the list of significant genes using the SAM procedure |
| IsoRawp | IsoRawp |
| IsoSAMPlot | Plots produced using the SAM procedure |
| IsoTestBH | Test of monotonic trends using the five test statistics with BH or BY adjustment |
| IsoTestSAM | Obtaining the list of significant genes using the SAM procedure |