Statistical Tools for Topological Data Analysis

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Documentation for package ‘TDA’ version 1.9.4

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

TDA-package	Statistical Tools for Topological Data Analysis
alphaComplexDiag	Alpha Complex Persistence Diagram
alphaComplexFiltration	Alpha Complex Filtration
alphaShapeDiag	Persistence Diagram of Alpha Shape in 3d
alphaShapeFiltration	Alpha Shape Filtration in 3d
bootstrapBand	Bootstrap Confidence Band
bootstrapDiagram	Bootstrapped Confidence Set for a Persistence Diagram, using the Bottleneck Distance (or the Wasserstein distance).
bottleneck	Bottleneck distance between two persistence diagrams
circleUnif	Uniform Sample From The Circle
clusterTree	Density clustering: the cluster tree
distFct	Distance function
dtm	Distance to Measure Function
filtrationDiag	Persistence Diagram of Filtration
funFiltration	Filtration from function values
gridDiag	Persistence Diagram of a function over a Grid
gridFiltration	Persistence Diagram of a function over a Grid
hausdInterval	Subsampling Confidence Interval for the Hausdorff Distance between a Manifold and a Sample
kde	Kernel Density Estimator over a Grid of Points
kernelDist	Kernel distance over a Grid of Points
knnDE	k Nearest Neighbors Density Estimator over a Grid of Points
landscape	The Persistence Landscape Function
maxPersistence	Maximal Persistence Method
multipBootstrap	Multiplier Bootstrap for Persistence Landscapes and Silhouettes
plot.clusterTree	Plots the Cluster Tree
plot.diagram	Plot the Persistence Diagram
plot.maxPersistence	Summary plot for the maxPersistence function
print.clusterTree	Density clustering: the cluster tree
print.diagram	'print' and 'summary' for 'diagram'
print.maxPersistence	Maximal Persistence Method
print.summary.diagram	'print' and 'summary' for 'diagram'
print.summary.maxPersistence	Maximal Persistence Method
ripsDiag	Rips Persistence Diagram
ripsFiltration	Rips Filtration
silhouette	The Persistence Silhouette Function
sphereUnif	Uniform Sample From The Sphere S^d
summary.diagram	'print' and 'summary' for 'diagram'
summary.maxPersistence	Maximal Persistence Method
TDA	Statistical Tools for Topological Data Analysis
torusUnif	Uniform Sample From The 3D Torus
wasserstein	Wasserstein distance between two persistence diagrams