Last updated on 2025-10-21 00:50:52 CEST.
| Package | NOTE | OK |
|---|---|---|
| immunarch | 4 | 9 |
| immundata | 1 | 12 |
Current CRAN status: NOTE: 4, OK: 9
Version: 0.10.3
Check: HTML version of manual
Result: NOTE
Found the following HTML validation problems:
im_common_args.html:56:1 (im_common_args.Rd:18): Warning: missing </ul> before </div>
repFilter.html:120:1 (repFilter.Rd:59): Warning: missing </ul> before </div>
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.9.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
coding.Rd: data.table, copy_to
dbAnnotate.Rd: data.table, copy_to
geneUsage.Rd: data.table, copy_to
getKmers.Rd: data.table, copy_to
immunr_hclust.Rd: fviz_nbclust, hcut, dbscan
immunr_pca.Rd: isoMDS, Rtsne
inc_overlap.Rd: data.table, copy_to
pubRep.Rd: data.table, copy_to
repAlignLineage.Rd: data.table
repClonality.Rd: data.table, copy_to
repDiversity.Rd: data.table, copy_to
repExplore.Rd: data.table, copy_to
repGermline.Rd: data.table
repOverlap.Rd: data.table, copy_to
repSample.Rd: data.table, copy_to
select_barcodes.Rd: data.table, copy_to
seqCluster.Rd: data.table
seqDist.Rd: data.table
spectratype.Rd: data.table, copy_to
top.Rd: data.table, copy_to
trackClonotypes.Rd: data.table, copy_to
vis.immunr_gene_usage.Rd: chordDiagram
vis.immunr_hclust.Rd: fviz_dend
vis.immunr_kmeans.Rd: fviz_cluster
vis.immunr_ov_matrix.Rd: chordDiagram
vis.immunr_public_statistics.Rd: upset
vis_box.Rd: melt
vis_circos.Rd: chordDiagram
vis_hist.Rd: melt
vis_textlogo.Rd: geom_logo
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavor: r-patched-linux-x86_64
Version: 0.10.3
Check: installed package size
Result: NOTE
installed size is 5.2Mb
sub-directories of 1Mb or more:
data 2.4Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: NOTE: 1, OK: 12
Version: 0.0.5
Check: HTML version of manual
Result: NOTE
Found the following HTML validation problems:
ImmunData.html:128:1 (ImmunData.Rd:77): Warning: <h5> anchor "Usage" already defined
ImmunData.html:134:1 (ImmunData.Rd:81): Warning: <h5> anchor "Arguments" already defined
count.ImmunData.html:63:1 (count.ImmunData.Rd:18): Warning: missing </ul> before </div>
imd_schema.html:72:1 (imd_schema.Rd:38): Warning: missing </ul> before </div>
Flavor: r-devel-linux-x86_64-debian-gcc