CRAN Package Check Results for Maintainer ‘Sam Watson <s.i.watson at bham.ac.uk>’

Last updated on 2025-10-21 00:50:51 CEST.

Package	NOTE	OK
crctStepdown	2	11
glmmrBase	4	9
glmmrOptim	3	10
marginme		13
rts2	4	9
SparseChol		13

Package crctStepdown

Current CRAN status: NOTE: 2, OK: 11

Version: 0.5.2
Check: installed package size
Result: NOTE installed size is 50.2Mb sub-directories of 1Mb or more: libs 50.1Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package glmmrBase

Current CRAN status: NOTE: 4, OK: 9

Version: 1.1.0
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: Covariance.html:186:1 (Covariance.Rd:149): Warning: <h5> anchor "Usage" already defined Covariance.html:210:1 (Covariance.Rd:165): Warning: <h5> anchor "Returns" already defined Covariance.html:242:1 (Covariance.Rd:188): Warning: <h5> anchor "Usage" already defined Covariance.html:248:1 (Covariance.Rd:192): Warning: <h5> anchor "Arguments" already defined Covariance.html:271:1 (Covariance.Rd:205): Warning: <h5> anchor "Usage" already defined Covariance.html:277:1 (Covariance.Rd:209): Warning: <h5> anchor "Arguments" already defined Covariance.html:290:1 (Covariance.Rd:216): Warning: <h5> anchor "Examples" already defined Covariance.html:315:1 (Covariance.Rd:236): Warning: <h5> anchor "Usage" already defined Covariance.html:321:1 (Covariance.Rd:240): Warning: <h5> anchor "Arguments" already defined Covariance.html:334:1 (Covariance.Rd:247): Warning: <h5> anchor "Examples" already defined Covariance.html:360:1 (Covariance.Rd:268): Warning: <h5> anchor "Usage" already defined Covariance.html:366:1 (Covariance.Rd:272): Warning: <h5> anchor "Returns" already defined Covariance.html:384:1 (Covariance.Rd:282): Warning: <h5> anchor "Usage" already defined Covariance.html:390:1 (Covariance.Rd:286): Warning: <h5> anchor "Arguments" already defined Covariance.html:403:1 (Covariance.Rd:293): Warning: <h5> anchor "Returns" already defined Covariance.html:421:1 (Covariance.Rd:303): Warning: <h5> anchor "Usage" already defined Covariance.html:427:1 (Covariance.Rd:307): Warning: <h5> anchor "Returns" already defined Covariance.html:444:1 (Covariance.Rd:316): Warning: <h5> anchor "Usage" already defined Covariance.html:450:1 (Covariance.Rd:320): Warning: <h5> anchor "Arguments" already defined Covariance.html:466:1 (Covariance.Rd:330): Warning: <h5> anchor "Returns" already defined Covariance.html:484:1 (Covariance.Rd:340): Warning: <h5> anchor "Usage" already defined Covariance.html:490:1 (Covariance.Rd:344): Warning: <h5> anchor "Returns" already defined Covariance.html:507:1 (Covariance.Rd:353): Warning: <h5> anchor "Usage" already defined Covariance.html:513:1 (Covariance.Rd:357): Warning: <h5> anchor "Arguments" already defined Covariance.html:527:1 (Covariance.Rd:365): Warning: <h5> anchor "Returns" already defined Covariance.html:546:1 (Covariance.Rd:376): Warning: <h5> anchor "Usage" already defined Covariance.html:552:1 (Covariance.Rd:380): Warning: <h5> anchor "Arguments" already defined Covariance.html:569:1 (Covariance.Rd:391): Warning: <h5> anchor "Returns" already defined Covariance.html:588:1 (Covariance.Rd:402): Warning: <h5> anchor "Usage" already defined Covariance.html:594:1 (Covariance.Rd:406): Warning: <h5> anchor "Arguments" already defined MeanFunction.html:186:1 (MeanFunction.Rd:178): Warning: <h5> anchor "Usage" already defined MeanFunction.html:198:1 (MeanFunction.Rd:188): Warning: <h5> anchor "Arguments" already defined MeanFunction.html:220:1 (MeanFunction.Rd:204): Warning: <h5> anchor "Returns" already defined MeanFunction.html:227:1 (MeanFunction.Rd:207): Warning: <h5> anchor "Examples" already defined MeanFunction.html:255:1 (MeanFunction.Rd:230): Warning: <h5> anchor "Usage" already defined MeanFunction.html:261:1 (MeanFunction.Rd:234): Warning: <h5> anchor "Arguments" already defined MeanFunction.html:284:1 (MeanFunction.Rd:247): Warning: <h5> anchor "Usage" already defined MeanFunction.html:290:1 (MeanFunction.Rd:251): Warning: <h5> anchor "Arguments" already defined MeanFunction.html:315:1 (MeanFunction.Rd:266): Warning: <h5> anchor "Usage" already defined MeanFunction.html:321:1 (MeanFunction.Rd:270): Warning: <h5> anchor "Arguments" already defined MeanFunction.html:335:1 (MeanFunction.Rd:278): Warning: <h5> anchor "Examples" already defined MeanFunction.html:368:1 (MeanFunction.Rd:306): Warning: <h5> anchor "Usage" already defined MeanFunction.html:374:1 (MeanFunction.Rd:310): Warning: <h5> anchor "Arguments" already defined MeanFunction.html:387:1 (MeanFunction.Rd:317): Warning: <h5> anchor "Returns" already defined MeanFunction.html:394:1 (MeanFunction.Rd:320): Warning: <h5> anchor "Examples" already defined MeanFunction.html:425:1 (MeanFunction.Rd:346): Warning: <h5> anchor "Usage" already defined MeanFunction.html:431:1 (MeanFunction.Rd:350): Warning: <h5> anchor "Returns" already defined MeanFunction.html:449:1 (MeanFunction.Rd:360): Warning: <h5> anchor "Usage" already defined MeanFunction.html:455:1 (MeanFunction.Rd:364): Warning: <h5> anchor "Returns" already defined MeanFunction.html:472:1 (MeanFunction.Rd:373): Warning: <h5> anchor "Usage" already defined MeanFunction.html:478:1 (MeanFunction.Rd:377): Warning: <h5> anchor "Arguments" already defined Model.html:340:1 (Model.Rd:439): Warning: <h5> anchor "Usage" already defined Model.html:346:1 (Model.Rd:443): Warning: <h5> anchor "Arguments" already defined Model.html:369:1 (Model.Rd:460): Warning: <h5> anchor "Returns" already defined Model.html:391:1 (Model.Rd:474): Warning: <h5> anchor "Usage" already defined Model.html:397:1 (Model.Rd:478): Warning: <h5> anchor "Arguments" already defined Model.html:412:1 (Model.Rd:487): Warning: <h5> anchor "Returns" already defined Model.html:436:1 (Model.Rd:503): Warning: <h5> anchor "Usage" already defined Model.html:442:1 (Model.Rd:507): Warning: <h5> anchor "Arguments" already defined Model.html:459:1 (Model.Rd:518): Warning: <h5> anchor "Returns" already defined Model.html:478:1 (Model.Rd:529): Warning: <h5> anchor "Usage" already defined Model.html:495:1 (Model.Rd:544): Warning: <h5> anchor "Arguments" already defined Model.html:538:1 (Model.Rd:581): Warning: <h5> anchor "Returns" already defined Model.html:616:1 (Model.Rd:650): Warning: <h5> anchor "Usage" already defined Model.html:622:1 (Model.Rd:654): Warning: <h5> anchor "Arguments" already defined Model.html:645:1 (Model.Rd:667): Warning: <h5> anchor "Usage" already defined Model.html:651:1 (Model.Rd:671): Warning: <h5> anchor "Arguments" already defined Model.html:677:1 (Model.Rd:687): Warning: <h5> anchor "Usage" already defined Model.html:683:1 (Model.Rd:691): Warning: <h5> anchor "Arguments" already defined Model.html:696:1 (Model.Rd:698): Warning: <h5> anchor "Returns" already defined Model.html:716:1 (Model.Rd:710): Warning: <h5> anchor "Usage" already defined Model.html:722:1 (Model.Rd:714): Warning: <h5> anchor "Arguments" already defined Model.html:738:1 (Model.Rd:724): Warning: <h5> anchor "Returns" already defined Model.html:745:1 (Model.Rd:727): Warning: <h5> anchor "Examples" already defined Model.html:777:1 (Model.Rd:754): Warning: <h5> anchor "Usage" already defined Model.html:783:1 (Model.Rd:758): Warning: <h5> anchor "Arguments" already defined Model.html:800:1 (Model.Rd:769): Warning: <h5> anchor "Examples" already defined Model.html:833:1 (Model.Rd:797): Warning: <h5> anchor "Usage" already defined Model.html:839:1 (Model.Rd:801): Warning: <h5> anchor "Arguments" already defined Model.html:858:1 (Model.Rd:814): Warning: <h5> anchor "Returns" already defined Model.html:875:1 (Model.Rd:823): Warning: <h5> anchor "Usage" already defined Model.html:881:1 (Model.Rd:827): Warning: <h5> anchor "Returns" already defined Model.html:904:1 (Model.Rd:842): Warning: <h5> anchor "Usage" already defined Model.html:910:1 (Model.Rd:846): Warning: <h5> anchor "Arguments" already defined Model.html:925:1 (Model.Rd:855): Warning: <h5> anchor "Returns" already defined Model.html:943:1 (Model.Rd:865): Warning: <h5> anchor "Usage" already defined Model.html:949:1 (Model.Rd:869): Warning: <h5> anchor "Arguments" already defined Model.html:963:1 (Model.Rd:877): Warning: <h5> anchor "Returns" already defined Model.html:987:1 (Model.Rd:892): Warning: <h5> anchor "Usage" already defined Model.html:993:1 (Model.Rd:896): Warning: <h5> anchor "Arguments" already defined Model.html:1012:1 (Model.Rd:909): Warning: <h5> anchor "Returns" already defined Model.html:1020:1 (Model.Rd:913): Warning: <h5> anchor "Examples" already defined Model.html:1053:1 (Model.Rd:941): Warning: <h5> anchor "Usage" already defined Model.html:1059:1 (Model.Rd:945): Warning: <h5> anchor "Returns" already defined Model.html:1076:1 (Model.Rd:954): Warning: <h5> anchor "Usage" already defined Model.html:1082:1 (Model.Rd:958): Warning: <h5> anchor "Returns" already defined Model.html:1101:1 (Model.Rd:969): Warning: <h5> anchor "Usage" already defined Model.html:1107:1 (Model.Rd:973): Warning: <h5> anchor "Arguments" already defined Model.html:1120:1 (Model.Rd:980): Warning: <h5> anchor "Returns" already defined Model.html:1137:1 (Model.Rd:989): Warning: <h5> anchor "Usage" already defined Model.html:1167:1 (Model.Rd:1017): Warning: <h5> anchor "Arguments" already defined Model.html:1248:1 (Model.Rd:1092): Warning: <h5> anchor "Returns" already defined Model.html:1255:1 (Model.Rd:1095): Warning: <h5> anchor "Examples" already defined Model.html:1347:1 (Model.Rd:1182): Warning: <h5> anchor "Usage" already defined Model.html:1368:1 (Model.Rd:1201): Warning: <h5> anchor "Arguments" already defined Model.html:1415:1 (Model.Rd:1242): Warning: <h5> anchor "Returns" already defined Model.html:1422:1 (Model.Rd:1245): Warning: <h5> anchor "Examples" already defined Model.html:1459:1 (Model.Rd:1277): Warning: <h5> anchor "Usage" already defined Model.html:1465:1 (Model.Rd:1281): Warning: <h5> anchor "Arguments" already defined Model.html:1481:1 (Model.Rd:1291): Warning: <h5> anchor "Returns" already defined Model.html:1498:1 (Model.Rd:1300): Warning: <h5> anchor "Usage" already defined Model.html:1504:1 (Model.Rd:1304): Warning: <h5> anchor "Arguments" already defined Model.html:1522:1 (Model.Rd:1316): Warning: <h5> anchor "Returns" already defined Model.html:1542:1 (Model.Rd:1328): Warning: <h5> anchor "Usage" already defined Model.html:1548:1 (Model.Rd:1332): Warning: <h5> anchor "Arguments" already defined Model.html:1565:1 (Model.Rd:1343): Warning: <h5> anchor "Returns" already defined Model.html:1588:1 (Model.Rd:1358): Warning: <h5> anchor "Usage" already defined Model.html:1594:1 (Model.Rd:1362): Warning: <h5> anchor "Returns" already defined Model.html:1611:1 (Model.Rd:1371): Warning: <h5> anchor "Usage" already defined Model.html:1617:1 (Model.Rd:1375): Warning: <h5> anchor "Arguments" already defined Model.html:1633:1 (Model.Rd:1385): Warning: <h5> anchor "Returns" already defined Model.html:1653:1 (Model.Rd:1397): Warning: <h5> anchor "Usage" already defined Model.html:1659:1 (Model.Rd:1401): Warning: <h5> anchor "Arguments" already defined Model.html:1674:1 (Model.Rd:1410): Warning: <h5> anchor "Returns" already defined Model.html:1695:1 (Model.Rd:1423): Warning: <h5> anchor "Usage" already defined Model.html:1701:1 (Model.Rd:1427): Warning: <h5> anchor "Returns" already defined Model.html:1735:1 (Model.Rd:1453): Warning: <h5> anchor "Usage" already defined Model.html:1753:1 (Model.Rd:1469): Warning: <h5> anchor "Arguments" already defined Model.html:1789:1 (Model.Rd:1499): Warning: <h5> anchor "Returns" already defined Model.html:1809:1 (Model.Rd:1511): Warning: <h5> anchor "Usage" already defined Model.html:1815:1 (Model.Rd:1515): Warning: <h5> anchor "Arguments" already defined Model.html:1828:1 (Model.Rd:1522): Warning: <h5> anchor "Returns" already defined Model.html:1845:1 (Model.Rd:1531): Warning: <h5> anchor "Usage" already defined Model.html:1851:1 (Model.Rd:1535): Warning: <h5> anchor "Arguments" already defined Model.html:1864:1 (Model.Rd:1542): Warning: <h5> anchor "Returns" already defined Model.html:1881:1 (Model.Rd:1551): Warning: <h5> anchor "Usage" already defined Model.html:1887:1 (Model.Rd:1555): Warning: <h5> anchor "Arguments" already defined Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.0
Check: installed package size
Result: NOTE installed size is 153.8Mb sub-directories of 1Mb or more: libs 152.4Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.1.0
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package glmmrOptim

Current CRAN status: NOTE: 3, OK: 10

Version: 0.3.6
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: DesignSpace.html:247:1 (DesignSpace.Rd:293): Warning: <h5> anchor "Usage" already defined DesignSpace.html:253:1 (DesignSpace.Rd:297): Warning: <h5> anchor "Arguments" already defined DesignSpace.html:266:1 (DesignSpace.Rd:304): Warning: <h5> anchor "Returns" already defined DesignSpace.html:273:1 (DesignSpace.Rd:307): Warning: <h5> anchor "Examples" already defined DesignSpace.html:292:1 (DesignSpace.Rd:321): Warning: <h5> anchor "Usage" already defined DesignSpace.html:298:1 (DesignSpace.Rd:325): Warning: <h5> anchor "Arguments" already defined DesignSpace.html:311:1 (DesignSpace.Rd:332): Warning: <h5> anchor "Returns" already defined DesignSpace.html:318:1 (DesignSpace.Rd:335): Warning: <h5> anchor "Examples" already defined DesignSpace.html:337:1 (DesignSpace.Rd:349): Warning: <h5> anchor "Usage" already defined DesignSpace.html:343:1 (DesignSpace.Rd:353): Warning: <h5> anchor "Arguments" already defined DesignSpace.html:356:1 (DesignSpace.Rd:360): Warning: <h5> anchor "Returns" already defined DesignSpace.html:363:1 (DesignSpace.Rd:363): Warning: <h5> anchor "Examples" already defined DesignSpace.html:382:1 (DesignSpace.Rd:377): Warning: <h5> anchor "Usage" already defined DesignSpace.html:388:1 (DesignSpace.Rd:381): Warning: <h5> anchor "Examples" already defined DesignSpace.html:409:1 (DesignSpace.Rd:397): Warning: <h5> anchor "Usage" already defined DesignSpace.html:429:1 (DesignSpace.Rd:415): Warning: <h5> anchor "Arguments" already defined DesignSpace.html:476:1 (DesignSpace.Rd:456): Warning: <h5> anchor "Returns" already defined DesignSpace.html:486:1 (DesignSpace.Rd:462): Warning: <h5> anchor "Examples" already defined DesignSpace.html:548:1 (DesignSpace.Rd:519): Warning: <h5> anchor "Usage" already defined DesignSpace.html:554:1 (DesignSpace.Rd:523): Warning: <h5> anchor "Arguments" already defined DesignSpace.html:567:1 (DesignSpace.Rd:530): Warning: <h5> anchor "Examples" already defined DesignSpace.html:586:1 (DesignSpace.Rd:544): Warning: <h5> anchor "Usage" already defined DesignSpace.html:592:1 (DesignSpace.Rd:548): Warning: <h5> anchor "Arguments" already defined Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.3.6
Check: installed package size
Result: NOTE installed size is 45.7Mb sub-directories of 1Mb or more: libs 45.5Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package marginme

Current CRAN status: OK: 13

Package rts2

Current CRAN status: NOTE: 4, OK: 9

Version: 0.9.1
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: grid.html:401:1 (grid.Rd:512): Warning: <h5> anchor "Usage" already defined grid.html:407:1 (grid.Rd:516): Warning: <h5> anchor "Returns" already defined grid.html:424:1 (grid.Rd:525): Warning: <h5> anchor "Usage" already defined grid.html:430:1 (grid.Rd:529): Warning: <h5> anchor "Arguments" already defined grid.html:443:1 (grid.Rd:536): Warning: <h5> anchor "Returns" already defined grid.html:450:1 (grid.Rd:539): Warning: <h5> anchor "Examples" already defined grid.html:477:1 (grid.Rd:561): Warning: <h5> anchor "Usage" already defined grid.html:489:1 (grid.Rd:571): Warning: <h5> anchor "Arguments" already defined grid.html:514:1 (grid.Rd:590): Warning: <h5> anchor "Returns" already defined grid.html:521:1 (grid.Rd:593): Warning: <h5> anchor "Examples" already defined grid.html:547:1 (grid.Rd:614): Warning: <h5> anchor "Usage" already defined grid.html:560:1 (grid.Rd:625): Warning: <h5> anchor "Arguments" already defined grid.html:587:1 (grid.Rd:646): Warning: <h5> anchor "Returns" already defined grid.html:594:1 (grid.Rd:649): Warning: <h5> anchor "Examples" already defined grid.html:638:1 (grid.Rd:688): Warning: <h5> anchor "Usage" already defined grid.html:644:1 (grid.Rd:692): Warning: <h5> anchor "Returns" already defined grid.html:651:1 (grid.Rd:695): Warning: <h5> anchor "Examples" already defined grid.html:679:1 (grid.Rd:718): Warning: <h5> anchor "Usage" already defined grid.html:685:1 (grid.Rd:722): Warning: <h5> anchor "Returns" already defined grid.html:702:1 (grid.Rd:731): Warning: <h5> anchor "Usage" already defined grid.html:726:1 (grid.Rd:753): Warning: <h5> anchor "Arguments" already defined grid.html:785:1 (grid.Rd:806): Warning: <h5> anchor "Returns" already defined grid.html:792:1 (grid.Rd:809): Warning: <h5> anchor "Examples" already defined grid.html:852:1 (grid.Rd:864): Warning: <h5> anchor "Usage" already defined grid.html:882:1 (grid.Rd:892): Warning: <h5> anchor "Arguments" already defined grid.html:962:1 (grid.Rd:966): Warning: <h5> anchor "Returns" already defined grid.html:969:1 (grid.Rd:969): Warning: <h5> anchor "Examples" already defined grid.html:1020:1 (grid.Rd:1015): Warning: <h5> anchor "Usage" already defined grid.html:1032:1 (grid.Rd:1025): Warning: <h5> anchor "Arguments" already defined grid.html:1057:1 (grid.Rd:1044): Warning: <h5> anchor "Returns" already defined grid.html:1064:1 (grid.Rd:1047): Warning: <h5> anchor "Examples" already defined grid.html:1093:1 (grid.Rd:1071): Warning: <h5> anchor "Usage" already defined grid.html:1107:1 (grid.Rd:1083): Warning: <h5> anchor "Arguments" already defined grid.html:1139:1 (grid.Rd:1109): Warning: <h5> anchor "Returns" already defined grid.html:1146:1 (grid.Rd:1112): Warning: <h5> anchor "Examples" already defined grid.html:1169:1 (grid.Rd:1130): Warning: <h5> anchor "Usage" already defined grid.html:1181:1 (grid.Rd:1140): Warning: <h5> anchor "Arguments" already defined grid.html:1205:1 (grid.Rd:1158): Warning: <h5> anchor "Returns" already defined grid.html:1213:1 (grid.Rd:1162): Warning: <h5> anchor "Examples" already defined grid.html:1258:1 (grid.Rd:1202): Warning: <h5> anchor "Usage" already defined grid.html:1264:1 (grid.Rd:1206): Warning: <h5> anchor "Returns" already defined grid.html:1271:1 (grid.Rd:1209): Warning: <h5> anchor "Examples" already defined grid.html:1297:1 (grid.Rd:1230): Warning: <h5> anchor "Usage" already defined grid.html:1303:1 (grid.Rd:1234): Warning: <h5> anchor "Returns" already defined grid.html:1320:1 (grid.Rd:1243): Warning: <h5> anchor "Usage" already defined grid.html:1326:1 (grid.Rd:1247): Warning: <h5> anchor "Arguments" already defined grid.html:1345:1 (grid.Rd:1260): Warning: <h5> anchor "Returns" already defined grid.html:1366:1 (grid.Rd:1273): Warning: <h5> anchor "Usage" already defined grid.html:1372:1 (grid.Rd:1277): Warning: <h5> anchor "Arguments" already defined grid.html:1389:1 (grid.Rd:1288): Warning: <h5> anchor "Returns" already defined grid.html:1409:1 (grid.Rd:1300): Warning: <h5> anchor "Usage" already defined grid.html:1415:1 (grid.Rd:1304): Warning: <h5> anchor "Arguments" already defined grid.html:1438:1 (grid.Rd:1321): Warning: <h5> anchor "Returns" already defined grid.html:1456:1 (grid.Rd:1331): Warning: <h5> anchor "Usage" already defined grid.html:1462:1 (grid.Rd:1335): Warning: <h5> anchor "Returns" already defined grid.html:1480:1 (grid.Rd:1345): Warning: <h5> anchor "Usage" already defined grid.html:1486:1 (grid.Rd:1349): Warning: <h5> anchor "Arguments" already defined grid.html:1499:1 (grid.Rd:1356): Warning: <h5> anchor "Returns" already defined grid.html:1516:1 (grid.Rd:1365): Warning: <h5> anchor "Usage" already defined grid.html:1522:1 (grid.Rd:1369): Warning: <h5> anchor "Arguments" already defined Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.9.1
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘cmdstanr’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.9.1
Check: installed package size
Result: NOTE installed size is 174.3Mb sub-directories of 1Mb or more: data 1.5Mb libs 171.9Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.9.1
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package SparseChol

Current CRAN status: OK: 13