CRAN Package Check Results for Maintainer Robrecht Cannoodt <rcannood at gmail.com>

CRAN Package Check Results for Maintainer ‘Robrecht Cannoodt <rcannood at gmail.com>’

Last updated on 2025-10-21 00:50:50 CEST.

Package	NOTE	OK
anndata	1	12
babelwhale	2	11
diffusionMap	2	11
dyndimred	5	8
dyngen	13
dynparam	5	8
dynutils	1	12
dynwrap	2	11
funkyheatmap		13
GillespieSSA		13
GillespieSSA2	4	9
incgraph	1	12
lmds	7	6
princurve	2	11
qsub	2	11
SCORPIUS	13

Package anndata

Current CRAN status: NOTE: 1, OK: 12

Version: 0.8.0
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: AnnData.html:421:1 (AnnData.Rd:642): Warning: <h5> anchor "Usage" already defined AnnData.html:427:1 (AnnData.Rd:646): Warning: <h5> anchor "Examples" already defined AnnData.html:456:1 (AnnData.Rd:670): Warning: <h5> anchor "Usage" already defined AnnData.html:462:1 (AnnData.Rd:674): Warning: <h5> anchor "Arguments" already defined AnnData.html:475:1 (AnnData.Rd:681): Warning: <h5> anchor "Examples" already defined AnnData.html:502:1 (AnnData.Rd:703): Warning: <h5> anchor "Usage" already defined AnnData.html:508:1 (AnnData.Rd:707): Warning: <h5> anchor "Examples" already defined AnnData.html:538:1 (AnnData.Rd:732): Warning: <h5> anchor "Usage" already defined AnnData.html:544:1 (AnnData.Rd:736): Warning: <h5> anchor "Examples" already defined AnnData.html:573:1 (AnnData.Rd:760): Warning: <h5> anchor "Usage" already defined AnnData.html:579:1 (AnnData.Rd:764): Warning: <h5> anchor "Arguments" already defined AnnData.html:592:1 (AnnData.Rd:771): Warning: <h5> anchor "Examples" already defined AnnData.html:619:1 (AnnData.Rd:793): Warning: <h5> anchor "Usage" already defined AnnData.html:625:1 (AnnData.Rd:797): Warning: <h5> anchor "Examples" already defined AnnData.html:655:1 (AnnData.Rd:822): Warning: <h5> anchor "Usage" already defined AnnData.html:661:1 (AnnData.Rd:826): Warning: <h5> anchor "Examples" already defined AnnData.html:687:1 (AnnData.Rd:847): Warning: <h5> anchor "Usage" already defined AnnData.html:693:1 (AnnData.Rd:851): Warning: <h5> anchor "Arguments" already defined AnnData.html:718:1 (AnnData.Rd:865): Warning: <h5> anchor "Examples" already defined AnnData.html:744:1 (AnnData.Rd:886): Warning: <h5> anchor "Usage" already defined AnnData.html:750:1 (AnnData.Rd:890): Warning: <h5> anchor "Arguments" already defined AnnData.html:763:1 (AnnData.Rd:897): Warning: <h5> anchor "Examples" already defined AnnData.html:789:1 (AnnData.Rd:918): Warning: <h5> anchor "Usage" already defined AnnData.html:795:1 (AnnData.Rd:922): Warning: <h5> anchor "Arguments" already defined AnnData.html:818:1 (AnnData.Rd:935): Warning: <h5> anchor "Usage" already defined AnnData.html:824:1 (AnnData.Rd:939): Warning: <h5> anchor "Arguments" already defined AnnData.html:837:1 (AnnData.Rd:946): Warning: <h5> anchor "Examples" already defined AnnData.html:866:1 (AnnData.Rd:970): Warning: <h5> anchor "Usage" already defined AnnData.html:872:1 (AnnData.Rd:974): Warning: <h5> anchor "Arguments" already defined AnnData.html:887:1 (AnnData.Rd:983): Warning: <h5> anchor "Examples" already defined AnnData.html:914:1 (AnnData.Rd:1005): Warning: <h5> anchor "Usage" already defined AnnData.html:920:1 (AnnData.Rd:1009): Warning: <h5> anchor "Arguments" already defined AnnData.html:933:1 (AnnData.Rd:1016): Warning: <h5> anchor "Examples" already defined AnnData.html:965:1 (AnnData.Rd:1043): Warning: <h5> anchor "Usage" already defined AnnData.html:971:1 (AnnData.Rd:1047): Warning: <h5> anchor "Arguments" already defined AnnData.html:984:1 (AnnData.Rd:1054): Warning: <h5> anchor "Examples" already defined AnnData.html:1020:1 (AnnData.Rd:1085): Warning: <h5> anchor "Usage" already defined AnnData.html:1026:1 (AnnData.Rd:1089): Warning: <h5> anchor "Examples" already defined AnnData.html:1055:1 (AnnData.Rd:1113): Warning: <h5> anchor "Usage" already defined AnnData.html:1061:1 (AnnData.Rd:1117): Warning: <h5> anchor "Arguments" already defined AnnData.html:1080:1 (AnnData.Rd:1130): Warning: <h5> anchor "Examples" already defined AnnData.html:1118:1 (AnnData.Rd:1163): Warning: <h5> anchor "Usage" already defined AnnData.html:1129:1 (AnnData.Rd:1172): Warning: <h5> anchor "Arguments" already defined AnnData.html:1149:1 (AnnData.Rd:1186): Warning: <h5> anchor "Examples" already defined AnnData.html:1184:1 (AnnData.Rd:1216): Warning: <h5> anchor "Usage" already defined AnnData.html:1190:1 (AnnData.Rd:1220): Warning: <h5> anchor "Arguments" already defined AnnData.html:1205:1 (AnnData.Rd:1229): Warning: <h5> anchor "Examples" already defined AnnData.html:1240:1 (AnnData.Rd:1259): Warning: <h5> anchor "Usage" already defined AnnData.html:1246:1 (AnnData.Rd:1263): Warning: <h5> anchor "Arguments" already defined AnnData.html:1271:1 (AnnData.Rd:1278): Warning: <h5> anchor "Usage" already defined AnnData.html:1277:1 (AnnData.Rd:1282): Warning: <h5> anchor "Arguments" already defined AnnData.html:1290:1 (AnnData.Rd:1289): Warning: <h5> anchor "Examples" already defined AnnData.html:1333:1 (AnnData.Rd:1327): Warning: <h5> anchor "Usage" already defined AnnData.html:1339:1 (AnnData.Rd:1331): Warning: <h5> anchor "Arguments" already defined AnnData.html:1362:1 (AnnData.Rd:1344): Warning: <h5> anchor "Usage" already defined Layers.html:136:1 (Layers.Rd:97): Warning: <h5> anchor "Usage" already defined Layers.html:142:1 (Layers.Rd:101): Warning: <h5> anchor "Arguments" already defined Layers.html:186:1 (Layers.Rd:134): Warning: <h5> anchor "Usage" already defined Layers.html:192:1 (Layers.Rd:138): Warning: <h5> anchor "Arguments" already defined Layers.html:215:1 (Layers.Rd:151): Warning: <h5> anchor "Usage" already defined Layers.html:221:1 (Layers.Rd:155): Warning: <h5> anchor "Arguments" already defined Layers.html:246:1 (Layers.Rd:170): Warning: <h5> anchor "Usage" already defined Layers.html:252:1 (Layers.Rd:174): Warning: <h5> anchor "Arguments" already defined Layers.html:275:1 (Layers.Rd:187): Warning: <h5> anchor "Usage" already defined Layers.html:291:1 (Layers.Rd:197): Warning: <h5> anchor "Usage" already defined Layers.html:307:1 (Layers.Rd:207): Warning: <h5> anchor "Usage" already defined Layers.html:313:1 (Layers.Rd:211): Warning: <h5> anchor "Arguments" already defined Layers.html:336:1 (Layers.Rd:224): Warning: <h5> anchor "Usage" already defined Raw.html:151:1 (Raw.Rd:179): Warning: <h5> anchor "Usage" already defined Raw.html:157:1 (Raw.Rd:183): Warning: <h5> anchor "Arguments" already defined Raw.html:195:1 (Raw.Rd:210): Warning: <h5> anchor "Usage" already defined Raw.html:201:1 (Raw.Rd:214): Warning: <h5> anchor "Examples" already defined Raw.html:233:1 (Raw.Rd:241): Warning: <h5> anchor "Usage" already defined Raw.html:239:1 (Raw.Rd:245): Warning: <h5> anchor "Arguments" already defined Raw.html:252:1 (Raw.Rd:252): Warning: <h5> anchor "Examples" already defined Raw.html:303:1 (Raw.Rd:298): Warning: <h5> anchor "Usage" already defined Raw.html:309:1 (Raw.Rd:302): Warning: <h5> anchor "Arguments" already defined Raw.html:332:1 (Raw.Rd:315): Warning: <h5> anchor "Usage" already defined all.equal.html:62:1 (all.equal.Rd:22): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Package babelwhale

Current CRAN status: NOTE: 2, OK: 11

Version: 1.2.0
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter), Joel Nitta [aut] (<https://orcid.org/0000-0003-4719-7472>, joelnitta)’ Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter), Joel Nitta [aut] (ORCID: <https://orcid.org/0000-0003-4719-7472>, github: joelnitta)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.2.0
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: singularity_image_path.html:46:1 (singularity_image_path.Rd:10): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Package diffusionMap

Current CRAN status: NOTE: 2, OK: 11

Version: 1.2.0
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Joseph Richards [aut] (joeyrichar), Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood)’ Authors@R: ‘Joseph Richards [aut] (github: joeyrichar), Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package dyndimred

Current CRAN status: NOTE: 5, OK: 8

Version: 1.0.4
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter)’ Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.4
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘lle’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.0.4
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package dyngen

Current CRAN status: NOTE: 13

Version: 1.0.5
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Robrecht Cannoodt <rcannood@gmail.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.5
Check: Rd files
Result: NOTE checkRd: (-1) generate_kinetics.Rd:57: Lost braces; missing escapes or markup? 57 | By default, sampled from {-1, 1} with probabilities {.25, .75}. | ^ checkRd: (-1) generate_kinetics.Rd:57: Lost braces; missing escapes or markup? 57 | By default, sampled from {-1, 1} with probabilities {.25, .75}. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package dynparam

Current CRAN status: NOTE: 5, OK: 8

Version: 1.0.2
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Robrecht Cannoodt <rcannood@gmail.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.2
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter)’ Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.2
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: collapse_set.html:58:1 (collapse_set.Rd:16): Warning: missing </ul> before </div> get_description.html:50:1 (get_description.Rd:12): Warning: missing </ul> before </div> range_parameter.html:73:1 (range_parameter.Rd:27): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.2
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package dynutils

Current CRAN status: NOTE: 1, OK: 12

Version: 1.0.12
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: deprecated.html:52:1 (deprecated.Rd:15): Warning: missing </ul> before </div> read_h5.html:60:1 (read_h5.Rd:23): Warning: missing </ul> before </div> recent_news.html:54:1 (recent_news.Rd:14): Warning: missing </ul> before </div> switch_devel.html:54:1 (switch_devel.Rd:18): Warning: missing </ul> before </div> test_h5_installation.html:48:1 (test_h5_installation.Rd:13): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Package dynwrap

Current CRAN status: NOTE: 2, OK: 11

Version: 1.2.4
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter)’ Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.2.4
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: convert_definition.html:46:1 (convert_definition.Rd:10): Warning: missing </ul> before </div> dot-method_process_definition.html:50:1 (dot-method_process_definition.Rd:12): Warning: missing </ul> before </div> get_default_parameters.html:46:1 (get_default_parameters.Rd:10): Warning: missing </ul> before </div> group_from_trajectory.html:52:1 (group_from_trajectory.Rd:16): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Package funkyheatmap

Current CRAN status: OK: 13

Package GillespieSSA

Current CRAN status: OK: 13

Package GillespieSSA2

Current CRAN status: NOTE: 4, OK: 9

Version: 0.3.0
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Robrecht Cannoodt <rcannood@gmail.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.3.0
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: plot_ssa.html:73:1 (plot_ssa.Rd:27): Warning: missing </ul> before </div> print_ssa.html:54:1 (print_ssa.Rd:15): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.3.0
Check: installed package size
Result: NOTE installed size is 5.7Mb sub-directories of 1Mb or more: doc 1.7Mb libs 3.4Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package incgraph

Current CRAN status: NOTE: 1, OK: 12

Version: 1.0.3
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: orca.halfdelta.html:54:1 (orca.halfdelta.Rd:14): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Package lmds

Current CRAN status: NOTE: 7, OK: 6

Version: 0.1.0
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter)’ Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.1.0
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘Matrix’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.1.0
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package princurve

Current CRAN status: NOTE: 2, OK: 11

Version: 2.1.6
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Robrecht Cannoodt <rcannood@gmail.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2.1.6
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Trevor Hastie [aut], Andreas Weingessel [aut], Kurt Hornik [aut] (<https://orcid.org/0000-0003-4198-9911>), Henrik Bengtsson [ctb] (HenrikBengtsson), Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood)’ Authors@R: ‘Trevor Hastie [aut], Andreas Weingessel [aut], Kurt Hornik [aut] (ORCID: <https://orcid.org/0000-0003-4198-9911>), Henrik Bengtsson [ctb] (github: HenrikBengtsson), Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2.1.6
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: deprecated.html:58:1 (deprecated.Rd:22): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Package qsub

Current CRAN status: NOTE: 2, OK: 11

Version: 1.1.3
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Robrecht Cannoodt <rcannood@gmail.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.1.3
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter)’ Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.1.3
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: cat_remote.html:56:1 (cat_remote.Rd:16): Warning: missing </ul> before </div> create_ssh_connection.html:47:1 (create_ssh_connection.Rd:11): Warning: missing </ul> before </div> get_default_qsub_config.html:47:1 (get_default_qsub_config.Rd:10): Warning: missing </ul> before </div> instantiate_qsub_config.html:48:1 (instantiate_qsub_config.Rd:12): Warning: missing </ul> before </div> is_job_running.html:46:1 (is_job_running.Rd:10): Warning: missing </ul> before </div> is_qsub_config.html:46:1 (is_qsub_config.Rd:10): Warning: missing </ul> before </div> is_remote_local.html:46:1 (is_remote_local.Rd:10): Warning: missing </ul> before </div> ls_remote.html:56:1 (ls_remote.Rd:16): Warning: missing </ul> before </div> mkdir_remote.html:57:1 (mkdir_remote.Rd:17): Warning: missing </ul> before </div> qacct.html:46:1 (qacct.Rd:10): Warning: missing </ul> before </div> qacct_remote.html:52:1 (qacct_remote.Rd:14): Warning: missing </ul> before </div> qstat_j.html:46:1 (qstat_j.Rd:10): Warning: missing </ul> before </div> qstat_j_remote.html:52:1 (qstat_j_remote.Rd:14): Warning: missing </ul> before </div> qstat_remote.html:52:1 (qstat_remote.Rd:14): Warning: missing </ul> before </div> qsub_retrieve.html:54:1 (qsub_retrieve.Rd:14): Warning: missing </ul> before </div> rm_remote.html:64:1 (rm_remote.Rd:20): Warning: missing </ul> before </div> test_qsub_config.html:46:1 (test_qsub_config.Rd:10): Warning: missing </ul> before </div> write_remote.html:60:1 (write_remote.Rd:18): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Package SCORPIUS

Current CRAN status: NOTE: 13

Version: 1.0.9
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [ctb] (<https://orcid.org/0000-0002-7114-6248>, zouter)’ Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [ctb] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.9
Check: Rd files
Result: NOTE checkRd: (-1) reduce_dimensionality.Rd:19: Lost braces 19 | \item{ndim}{the maximum dimension of the space which the data are to be represented in; must be in {1, 2, \ldots, n-1}.} | ^ checkRd: (-1) ti_scorpius.Rd:18: Lost braces; missing escapes or markup? 18 | \item{distance_method}{A character string indicating which correlationcoefficient (or covariance) is to be computed. One of "pearson", "spearman" (default), or "cosine". Domain: {spearman, pearson, cosine}. Default: spearman. Format: character.} | ^ checkRd: (-1) ti_scorpius.Rd:30: Lost braces; missing escapes or markup? 30 | \item{smoother}{\code{principal_curve} parameter; choice of smoother. Domain: {smooth_spline, lowess, periodic_lowess}. Default: smooth_spline. Format: character.} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64