CRAN Package Check Results for Maintainer Philip Mostert <philip.s.mostert at ntnu.no>

CRAN Package Check Results for Maintainer ‘Philip Mostert <philip.s.mostert at ntnu.no>’

Last updated on 2025-10-21 00:50:49 CEST.

Package	NOTE	OK
intSDM	3	10
PointedSDMs	3	10

Package intSDM

Current CRAN status: NOTE: 3, OK: 10

Version: 2.1.2
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: generateAbsences.html:73:1 (generateAbsences.Rd:27): Warning: missing </ul> before </div> species_model.html:131:1 (species_model.Rd:304): Warning: <h5> anchor "Usage" already defined species_model.html:146:1 (species_model.Rd:317): Warning: <h5> anchor "Arguments" already defined species_model.html:181:1 (species_model.Rd:343): Warning: <h5> anchor "Usage" already defined species_model.html:187:1 (species_model.Rd:347): Warning: <h5> anchor "Arguments" already defined species_model.html:231:1 (species_model.Rd:380): Warning: <h5> anchor "Usage" already defined species_model.html:237:1 (species_model.Rd:384): Warning: <h5> anchor "Arguments" already defined species_model.html:250:1 (species_model.Rd:391): Warning: <h5> anchor "Examples" already defined species_model.html:274:1 (species_model.Rd:410): Warning: <h5> anchor "Usage" already defined species_model.html:285:1 (species_model.Rd:419): Warning: <h5> anchor "Arguments" already defined species_model.html:311:1 (species_model.Rd:435): Warning: <h5> anchor "Examples" already defined species_model.html:339:1 (species_model.Rd:458): Warning: <h5> anchor "Usage" already defined species_model.html:345:1 (species_model.Rd:462): Warning: <h5> anchor "Arguments" already defined species_model.html:358:1 (species_model.Rd:469): Warning: <h5> anchor "Examples" already defined species_model.html:381:1 (species_model.Rd:487): Warning: <h5> anchor "Usage" already defined species_model.html:396:1 (species_model.Rd:500): Warning: <h5> anchor "Arguments" already defined species_model.html:423:1 (species_model.Rd:521): Warning: <h5> anchor "Examples" already defined species_model.html:459:1 (species_model.Rd:552): Warning: <h5> anchor "Usage" already defined species_model.html:465:1 (species_model.Rd:556): Warning: <h5> anchor "Arguments" already defined species_model.html:480:1 (species_model.Rd:565): Warning: <h5> anchor "Examples" already defined species_model.html:511:1 (species_model.Rd:591): Warning: <h5> anchor "Usage" already defined species_model.html:526:1 (species_model.Rd:604): Warning: <h5> anchor "Arguments" already defined species_model.html:553:1 (species_model.Rd:625): Warning: <h5> anchor "Examples" already defined species_model.html:583:1 (species_model.Rd:650): Warning: <h5> anchor "Usage" already defined species_model.html:597:1 (species_model.Rd:662): Warning: <h5> anchor "Arguments" already defined species_model.html:622:1 (species_model.Rd:681): Warning: <h5> anchor "Examples" already defined species_model.html:654:1 (species_model.Rd:708): Warning: <h5> anchor "Usage" already defined species_model.html:664:1 (species_model.Rd:716): Warning: <h5> anchor "Arguments" already defined species_model.html:681:1 (species_model.Rd:727): Warning: <h5> anchor "Examples" already defined species_model.html:705:1 (species_model.Rd:746): Warning: <h5> anchor "Usage" already defined species_model.html:711:1 (species_model.Rd:750): Warning: <h5> anchor "Arguments" already defined species_model.html:747:1 (species_model.Rd:761): Warning: <h5> anchor "Examples" already defined species_model.html:770:1 (species_model.Rd:779): Warning: <h5> anchor "Usage" already defined species_model.html:776:1 (species_model.Rd:783): Warning: <h5> anchor "Arguments" already defined species_model.html:789:1 (species_model.Rd:790): Warning: <h5> anchor "Examples" already defined species_model.html:823:1 (species_model.Rd:819): Warning: <h5> anchor "Usage" already defined species_model.html:837:1 (species_model.Rd:831): Warning: <h5> anchor "Arguments" already defined species_model.html:860:1 (species_model.Rd:848): Warning: <h5> anchor "Examples" already defined species_model.html:893:1 (species_model.Rd:876): Warning: <h5> anchor "Usage" already defined species_model.html:904:1 (species_model.Rd:885): Warning: <h5> anchor "Arguments" already defined species_model.html:923:1 (species_model.Rd:898): Warning: <h5> anchor "Examples" already defined species_model.html:957:1 (species_model.Rd:927): Warning: <h5> anchor "Usage" already defined species_model.html:963:1 (species_model.Rd:931): Warning: <h5> anchor "Arguments" already defined species_model.html:978:1 (species_model.Rd:940): Warning: <h5> anchor "Examples" already defined species_model.html:1011:1 (species_model.Rd:968): Warning: <h5> anchor "Usage" already defined species_model.html:1017:1 (species_model.Rd:972): Warning: <h5> anchor "Arguments" already defined species_model.html:1032:1 (species_model.Rd:981): Warning: <h5> anchor "Examples" already defined species_model.html:1063:1 (species_model.Rd:1007): Warning: <h5> anchor "Usage" already defined species_model.html:1069:1 (species_model.Rd:1011): Warning: <h5> anchor "Arguments" already defined Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.1.2
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘INLA’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 2.1.2
Check: Rd cross-references
Result: NOTE Package unavailable to check Rd xrefs: ‘INLA’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package PointedSDMs

Current CRAN status: NOTE: 3, OK: 10

Version: 2.1.4
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: dataOrganize.html:241:1 (dataOrganize.Rd:156): Warning: missing </ul> before </div> dataOrganize.html:96:1 (dataOrganize.Rd:49): Warning: <h5> anchor "Usage" already defined dataOrganize.html:110:1 (dataOrganize.Rd:58): Warning: <h5> anchor "Usage" already defined dataOrganize.html:124:1 (dataOrganize.Rd:67): Warning: <h5> anchor "Usage" already defined dataOrganize.html:157:1 (dataOrganize.Rd:95): Warning: <h5> anchor "Usage" already defined dataOrganize.html:195:1 (dataOrganize.Rd:128): Warning: <h5> anchor "Usage" already defined dataOrganize.html:218:1 (dataOrganize.Rd:145): Warning: <h5> anchor "Usage" already defined makeLhoods.html:103:1 (makeLhoods.Rd:45): Warning: missing </ul> before </div> nearestValue.html:54:1 (nearestValue.Rd:14): Warning: missing </ul> before </div> print.blockedCV.html:51:1 (print.blockedCV.Rd:12): Warning: missing </ul> before </div> print.blockedCVpred.html:51:1 (print.blockedCVpred.Rd:12): Warning: missing </ul> before </div> print.bruSDM.html:51:1 (print.bruSDM.Rd:12): Warning: missing </ul> before </div> print.bruSDM_predict.html:51:1 (print.bruSDM_predict.Rd:12): Warning: missing </ul> before </div> print.datasetOut.html:51:1 (print.datasetOut.Rd:12): Warning: missing </ul> before </div> print.modISDM.html:51:1 (print.modISDM.Rd:12): Warning: missing </ul> before </div> print.modMarks.html:51:1 (print.modMarks.Rd:12): Warning: missing </ul> before </div> print.modSpecies.html:51:1 (print.modSpecies.Rd:12): Warning: missing </ul> before </div> removeFormula.html:50:1 (removeFormula.Rd:12): Warning: missing </ul> before </div> specifyISDM.html:126:1 (specifyISDM.Rd:351): Warning: <h5> anchor "Usage" already defined specifyISDM.html:132:1 (specifyISDM.Rd:355): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:155:1 (specifyISDM.Rd:368): Warning: <h5> anchor "Usage" already defined specifyISDM.html:161:1 (specifyISDM.Rd:372): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:178:1 (specifyISDM.Rd:383): Warning: <h5> anchor "Returns" already defined specifyISDM.html:224:1 (specifyISDM.Rd:420): Warning: <h5> anchor "Usage" already defined specifyISDM.html:237:1 (specifyISDM.Rd:431): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:260:1 (specifyISDM.Rd:448): Warning: <h5> anchor "Returns" already defined specifyISDM.html:267:1 (specifyISDM.Rd:451): Warning: <h5> anchor "Examples" already defined specifyISDM.html:305:1 (specifyISDM.Rd:484): Warning: <h5> anchor "Usage" already defined specifyISDM.html:316:1 (specifyISDM.Rd:493): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:335:1 (specifyISDM.Rd:506): Warning: <h5> anchor "Returns" already defined specifyISDM.html:342:1 (specifyISDM.Rd:509): Warning: <h5> anchor "Examples" already defined specifyISDM.html:393:1 (specifyISDM.Rd:555): Warning: <h5> anchor "Usage" already defined specifyISDM.html:399:1 (specifyISDM.Rd:559): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:416:1 (specifyISDM.Rd:570): Warning: <h5> anchor "Returns" already defined specifyISDM.html:423:1 (specifyISDM.Rd:573): Warning: <h5> anchor "Examples" already defined specifyISDM.html:468:1 (specifyISDM.Rd:613): Warning: <h5> anchor "Usage" already defined specifyISDM.html:479:1 (specifyISDM.Rd:622): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:498:1 (specifyISDM.Rd:635): Warning: <h5> anchor "Returns" already defined specifyISDM.html:505:1 (specifyISDM.Rd:638): Warning: <h5> anchor "Examples" already defined specifyISDM.html:549:1 (specifyISDM.Rd:677): Warning: <h5> anchor "Usage" already defined specifyISDM.html:562:1 (specifyISDM.Rd:688): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:585:1 (specifyISDM.Rd:705): Warning: <h5> anchor "Returns" already defined specifyISDM.html:592:1 (specifyISDM.Rd:708): Warning: <h5> anchor "Examples" already defined specifyISDM.html:637:1 (specifyISDM.Rd:748): Warning: <h5> anchor "Usage" already defined specifyISDM.html:643:1 (specifyISDM.Rd:752): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:660:1 (specifyISDM.Rd:763): Warning: <h5> anchor "Returns" already defined specifyISDM.html:667:1 (specifyISDM.Rd:766): Warning: <h5> anchor "Examples" already defined specifyISDM.html:711:1 (specifyISDM.Rd:805): Warning: <h5> anchor "Usage" already defined specifyISDM.html:717:1 (specifyISDM.Rd:809): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:738:1 (specifyISDM.Rd:824): Warning: <h5> anchor "Returns" already defined specifyISDM.html:745:1 (specifyISDM.Rd:827): Warning: <h5> anchor "Examples" already defined specifyISDM.html:788:1 (specifyISDM.Rd:865): Warning: <h5> anchor "Usage" already defined specifyISDM.html:794:1 (specifyISDM.Rd:869): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:809:1 (specifyISDM.Rd:878): Warning: <h5> anchor "Returns" already defined specifyISDM.html:816:1 (specifyISDM.Rd:881): Warning: <h5> anchor "Examples" already defined specifyISDM.html:854:1 (specifyISDM.Rd:914): Warning: <h5> anchor "Usage" already defined specifyISDM.html:864:1 (specifyISDM.Rd:922): Warning: <h5> anchor "Arguments" already defined specifyISDM.html:881:1 (specifyISDM.Rd:933): Warning: <h5> anchor "Returns" already defined specifyISDM.html:888:1 (specifyISDM.Rd:936): Warning: <h5> anchor "Examples" already defined specifyISDM.html:925:1 (specifyISDM.Rd:969): Warning: <h5> anchor "Usage" already defined specifyISDM.html:958:1 (specifyISDM.Rd:997): Warning: <h5> anchor "Usage" already defined specifyMarks.html:126:1 (specifyMarks.Rd:345): Warning: <h5> anchor "Usage" already defined specifyMarks.html:132:1 (specifyMarks.Rd:349): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:155:1 (specifyMarks.Rd:362): Warning: <h5> anchor "Usage" already defined specifyMarks.html:161:1 (specifyMarks.Rd:366): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:178:1 (specifyMarks.Rd:377): Warning: <h5> anchor "Returns" already defined specifyMarks.html:226:1 (specifyMarks.Rd:416): Warning: <h5> anchor "Usage" already defined specifyMarks.html:239:1 (specifyMarks.Rd:427): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:262:1 (specifyMarks.Rd:444): Warning: <h5> anchor "Returns" already defined specifyMarks.html:269:1 (specifyMarks.Rd:447): Warning: <h5> anchor "Examples" already defined specifyMarks.html:308:1 (specifyMarks.Rd:481): Warning: <h5> anchor "Usage" already defined specifyMarks.html:320:1 (specifyMarks.Rd:491): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:341:1 (specifyMarks.Rd:506): Warning: <h5> anchor "Returns" already defined specifyMarks.html:348:1 (specifyMarks.Rd:509): Warning: <h5> anchor "Examples" already defined specifyMarks.html:389:1 (specifyMarks.Rd:545): Warning: <h5> anchor "Usage" already defined specifyMarks.html:395:1 (specifyMarks.Rd:549): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:412:1 (specifyMarks.Rd:560): Warning: <h5> anchor "Examples" already defined specifyMarks.html:455:1 (specifyMarks.Rd:598): Warning: <h5> anchor "Usage" already defined specifyMarks.html:466:1 (specifyMarks.Rd:607): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:485:1 (specifyMarks.Rd:620): Warning: <h5> anchor "Returns" already defined specifyMarks.html:492:1 (specifyMarks.Rd:623): Warning: <h5> anchor "Examples" already defined specifyMarks.html:536:1 (specifyMarks.Rd:662): Warning: <h5> anchor "Usage" already defined specifyMarks.html:550:1 (specifyMarks.Rd:674): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:575:1 (specifyMarks.Rd:693): Warning: <h5> anchor "Returns" already defined specifyMarks.html:582:1 (specifyMarks.Rd:696): Warning: <h5> anchor "Examples" already defined specifyMarks.html:628:1 (specifyMarks.Rd:737): Warning: <h5> anchor "Usage" already defined specifyMarks.html:634:1 (specifyMarks.Rd:741): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:655:1 (specifyMarks.Rd:756): Warning: <h5> anchor "Examples" already defined specifyMarks.html:702:1 (specifyMarks.Rd:798): Warning: <h5> anchor "Usage" already defined specifyMarks.html:708:1 (specifyMarks.Rd:802): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:729:1 (specifyMarks.Rd:817): Warning: <h5> anchor "Examples" already defined specifyMarks.html:770:1 (specifyMarks.Rd:853): Warning: <h5> anchor "Usage" already defined specifyMarks.html:776:1 (specifyMarks.Rd:857): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:791:1 (specifyMarks.Rd:866): Warning: <h5> anchor "Examples" already defined specifyMarks.html:830:1 (specifyMarks.Rd:900): Warning: <h5> anchor "Usage" already defined specifyMarks.html:840:1 (specifyMarks.Rd:908): Warning: <h5> anchor "Arguments" already defined specifyMarks.html:857:1 (specifyMarks.Rd:919): Warning: <h5> anchor "Returns" already defined specifyMarks.html:864:1 (specifyMarks.Rd:922): Warning: <h5> anchor "Examples" already defined specifyMarks.html:901:1 (specifyMarks.Rd:955): Warning: <h5> anchor "Usage" already defined specifyMarks.html:940:1 (specifyMarks.Rd:989): Warning: <h5> anchor "Usage" already defined specifySpecies.html:126:1 (specifySpecies.Rd:360): Warning: <h5> anchor "Usage" already defined specifySpecies.html:132:1 (specifySpecies.Rd:364): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:155:1 (specifySpecies.Rd:377): Warning: <h5> anchor "Usage" already defined specifySpecies.html:161:1 (specifySpecies.Rd:381): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:180:1 (specifySpecies.Rd:394): Warning: <h5> anchor "Returns" already defined specifySpecies.html:227:1 (specifySpecies.Rd:432): Warning: <h5> anchor "Usage" already defined specifySpecies.html:240:1 (specifySpecies.Rd:443): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:263:1 (specifySpecies.Rd:460): Warning: <h5> anchor "Returns" already defined specifySpecies.html:270:1 (specifySpecies.Rd:463): Warning: <h5> anchor "Examples" already defined specifySpecies.html:309:1 (specifySpecies.Rd:497): Warning: <h5> anchor "Usage" already defined specifySpecies.html:321:1 (specifySpecies.Rd:507): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:342:1 (specifySpecies.Rd:522): Warning: <h5> anchor "Returns" already defined specifySpecies.html:349:1 (specifySpecies.Rd:525): Warning: <h5> anchor "Examples" already defined specifySpecies.html:399:1 (specifySpecies.Rd:570): Warning: <h5> anchor "Usage" already defined specifySpecies.html:405:1 (specifySpecies.Rd:574): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:422:1 (specifySpecies.Rd:585): Warning: <h5> anchor "Returns" already defined specifySpecies.html:429:1 (specifySpecies.Rd:588): Warning: <h5> anchor "Examples" already defined specifySpecies.html:476:1 (specifySpecies.Rd:630): Warning: <h5> anchor "Usage" already defined specifySpecies.html:488:1 (specifySpecies.Rd:640): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:509:1 (specifySpecies.Rd:655): Warning: <h5> anchor "Returns" already defined specifySpecies.html:516:1 (specifySpecies.Rd:658): Warning: <h5> anchor "Examples" already defined specifySpecies.html:561:1 (specifySpecies.Rd:698): Warning: <h5> anchor "Usage" already defined specifySpecies.html:575:1 (specifySpecies.Rd:710): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:600:1 (specifySpecies.Rd:729): Warning: <h5> anchor "Returns" already defined specifySpecies.html:607:1 (specifySpecies.Rd:732): Warning: <h5> anchor "Examples" already defined specifySpecies.html:653:1 (specifySpecies.Rd:773): Warning: <h5> anchor "Usage" already defined specifySpecies.html:659:1 (specifySpecies.Rd:777): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:676:1 (specifySpecies.Rd:788): Warning: <h5> anchor "Returns" already defined specifySpecies.html:683:1 (specifySpecies.Rd:791): Warning: <h5> anchor "Examples" already defined specifySpecies.html:728:1 (specifySpecies.Rd:831): Warning: <h5> anchor "Usage" already defined specifySpecies.html:734:1 (specifySpecies.Rd:835): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:755:1 (specifySpecies.Rd:850): Warning: <h5> anchor "Returns" already defined specifySpecies.html:762:1 (specifySpecies.Rd:853): Warning: <h5> anchor "Examples" already defined specifySpecies.html:807:1 (specifySpecies.Rd:893): Warning: <h5> anchor "Usage" already defined specifySpecies.html:813:1 (specifySpecies.Rd:897): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:828:1 (specifySpecies.Rd:906): Warning: <h5> anchor "Returns" already defined specifySpecies.html:835:1 (specifySpecies.Rd:909): Warning: <h5> anchor "Examples" already defined specifySpecies.html:873:1 (specifySpecies.Rd:942): Warning: <h5> anchor "Usage" already defined specifySpecies.html:888:1 (specifySpecies.Rd:955): Warning: <h5> anchor "Arguments" already defined specifySpecies.html:912:1 (specifySpecies.Rd:973): Warning: <h5> anchor "Examples" already defined specifySpecies.html:950:1 (specifySpecies.Rd:1007): Warning: <h5> anchor "Usage" already defined specifySpecies.html:988:1 (specifySpecies.Rd:1040): Warning: <h5> anchor "Usage" already defined summary.html:66:1 (summary.Rd:21): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.1.4
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘INLA’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 2.1.4
Check: Rd cross-references
Result: NOTE Package unavailable to check Rd xrefs: ‘INLA’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64