Last updated on 2025-07-04 00:50:08 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 12.00 | 206.47 | 218.47 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3 | 11.23 | 199.74 | 210.97 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 392.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 175.00 | ERROR | |||
| r-release-windows-x86_64 | 1.0.5 | 22.00 | 88.00 | 110.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 159.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.3 | 23.00 | 198.00 | 221.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.051, elapsed: 2.445 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.934, system: 0.099, elapsed: 11.219 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.738, system: 0.194, elapsed: 4.908 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.258 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.135, system: 0.387, elapsed: 19.807 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.031, elapsed: 2.116 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.978, system: 0.088, elapsed: 14.356 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.342 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.736, system: 0.175, elapsed: 6.717 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.312 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.076, system: 0.328, elapsed: 24.668 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.527, system: 0.027, elapsed: 2.252 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.992, system: 0.066, elapsed: 20.322 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.011, elapsed: 0.478 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.669, system: 0.178, elapsed: 9.238 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.301 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.144, system: 0.241, elapsed: 1.334 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.304, system: 0.549, elapsed: 35.303 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.458, system: 0.029, elapsed: 2.486 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.965, system: 0.048, elapsed: 13.535 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.684, system: 0.208, elapsed: 5.959 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.007, elapsed: 0.237 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.331, system: 0.631, elapsed: 14.589 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.413, system: 0.969, elapsed: 38.120 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/104s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.412, system: 0.037, elapsed: 1.463 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.851, system: 0.072, elapsed: 9.727 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.262 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.655, system: 0.185, elapsed: 5.249 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.238 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.798, system: 0.330, elapsed: 17.607 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.549, system: 0.037, elapsed: 2.217 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.972, system: 0.069, elapsed: 12.960 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.011, elapsed: 0.272 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.523, system: 0.160, elapsed: 6.047 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.004, elapsed: 0.281 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.924, system: 0.300, elapsed: 22.505 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.542, system: 0.027, elapsed: 2.700 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.893, system: 0.045, elapsed: 14.407 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.494, system: 0.162, elapsed: 5.922 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.333 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.042, system: 0.256, elapsed: 0.937 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.948, system: 0.524, elapsed: 25.693 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.472, system: 0.027, elapsed: 2.122 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.915, system: 0.057, elapsed: 12.001 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.235 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.398, system: 0.152, elapsed: 4.027 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.006, elapsed: 0.170 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.055, system: 0.454, elapsed: 13.318 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.804, system: 0.737, elapsed: 32.712 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64