Last updated on 2025-12-06 00:48:48 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.27 | 250.38 | 264.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 0.26 | 1.40 | 1.66 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 31.00 | 284.18 | 315.18 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 184.00 | 202.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.70 | 287.77 | 303.47 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.30 | 269.49 | 283.79 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 163.00 | 175.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 208.00 | 220.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 236.00 | 261.00 | OK |
Version: 1.1.4
Check: package dependencies
Result: ERROR
Packages required but not available: 'fmesher', 'Rcpp', 's2', 'sf'
Packages suggested but not available for checking:
'dggridR', 'latticeExtra'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/114s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.597, system: 0.053, elapsed: 2.421 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.562, system: 0.168, elapsed: 12.473 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.018, elapsed: 0.308 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.817, system: 0.206, elapsed: 4.317 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.008, elapsed: 0.186 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.920, system: 0.486, elapsed: 20.463 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.040, elapsed: 1.720 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.226, system: 0.153, elapsed: 11.095 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.010, elapsed: 0.194 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.525, system: 0.172, elapsed: 4.155 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.010, elapsed: 0.202 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.179, system: 0.422, elapsed: 18.169 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.389, system: 0.032, elapsed: 1.610 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.173, system: 0.367, elapsed: 14.020 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.016, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.131, system: 0.286, elapsed: 6.717 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.010, elapsed: 0.336 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.233, system: 0.242, elapsed: 1.175 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.953, system: 1.005, elapsed: 25.041 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.920, system: 0.099, elapsed: 2.922 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.875, system: 0.238, elapsed: 14.669 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.015, elapsed: 0.315 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.910, system: 0.200, elapsed: 5.808 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.005, elapsed: 0.239 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.961, system: 0.621, elapsed: 18.000 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.708, system: 1.204, elapsed: 42.916 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/152s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.877, system: 0.105, elapsed: 3.213 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.712, system: 0.241, elapsed: 16.379 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.020, elapsed: 0.342 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.980, system: 0.298, elapsed: 7.331 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.007, elapsed: 0.377 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.490, system: 0.702, elapsed: 28.644 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.808, system: 0.081, elapsed: 2.614 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.940, system: 0.326, elapsed: 15.439 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.022, elapsed: 0.385 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.150, system: 0.348, elapsed: 9.541 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.314 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.820, system: 0.823, elapsed: 29.375 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.663, system: 0.047, elapsed: 4.335 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.553, system: 0.134, elapsed: 18.966 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.011, elapsed: 0.496 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.817, system: 0.191, elapsed: 9.242 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.332 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.199, system: 0.240, elapsed: 1.555 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.261, system: 0.670, elapsed: 36.613 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.630, system: 0.040, elapsed: 3.459 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.563, system: 0.081, elapsed: 16.732 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.330 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.806, system: 0.188, elapsed: 7.128 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.246 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.637, system: 0.485, elapsed: 19.900 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.663, system: 0.835, elapsed: 49.022 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64