Last updated on 2025-12-06 00:48:37 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.1 | 8.40 | 159.03 | 167.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.1 | 5.00 | 53.66 | 58.66 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.1 | 19.00 | 240.33 | 259.33 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.1 | 30.00 | 246.46 | 276.46 | OK | |
| r-devel-windows-x86_64 | 1.1.1 | 9.00 | 200.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.1 | 9.13 | 152.42 | 161.55 | OK | |
| r-release-linux-x86_64 | 1.1.1 | 6.87 | 153.63 | 160.50 | OK | |
| r-release-macos-arm64 | 1.1.1 | OK | ||||
| r-release-macos-x86_64 | 1.1.1 | 7.00 | 157.00 | 164.00 | OK | |
| r-release-windows-x86_64 | 1.1.1 | 9.00 | 196.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.1 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.1 | 5.00 | 111.00 | 116.00 | OK | |
| r-oldrel-windows-x86_64 | 1.1.1 | 13.00 | 243.00 | 256.00 | OK |
Version: 1.1.1
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking:
'knitr', 'minqa', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.1
Check: tests
Result: ERROR
Running ‘test-all.R’ [17s/17s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
> library(testthat)
> library("cxr")
> test_check("cxr")
Saving _problems/test-functions-146.R
Saving _problems/test-functions-147.R
Saving _problems/test-functions-158.R
Saving _problems/test-functions-146.R
Saving _problems/test-functions-147.R
Saving _problems/test-functions-158.R
Saving _problems/test-functions-146.R
Saving _problems/test-functions-147.R
Saving _problems/test-functions-158.R
Saving _problems/test-functions-146.R
Saving _problems/test-functions-147.R
Saving _problems/test-functions-158.R
Saving _problems/test-functions-191.R
Saving _problems/test-functions-192.R
Saving _problems/test-functions-194.R
Saving _problems/test-functions-203.R
Saving _problems/test-functions-191.R
Saving _problems/test-functions-192.R
Saving _problems/test-functions-194.R
Saving _problems/test-functions-203.R
Saving _problems/test-functions-191.R
Saving _problems/test-functions-192.R
Saving _problems/test-functions-194.R
Saving _problems/test-functions-203.R
Saving _problems/test-functions-191.R
Saving _problems/test-functions-192.R
Saving _problems/test-functions-194.R
Saving _problems/test-functions-203.R
Saving _problems/test-functions-236.R
Saving _problems/test-functions-237.R
Saving _problems/test-functions-238.R
Saving _problems/test-functions-239.R
Saving _problems/test-functions-240.R
Saving _problems/test-functions-249.R
Saving _problems/test-functions-236.R
Saving _problems/test-functions-237.R
Saving _problems/test-functions-238.R
Saving _problems/test-functions-239.R
Saving _problems/test-functions-240.R
Saving _problems/test-functions-249.R
Saving _problems/test-functions-236.R
Saving _problems/test-functions-237.R
Saving _problems/test-functions-238.R
Saving _problems/test-functions-239.R
Saving _problems/test-functions-240.R
Saving _problems/test-functions-249.R
Saving _problems/test-functions-236.R
Saving _problems/test-functions-237.R
Saving _problems/test-functions-238.R
Saving _problems/test-functions-239.R
Saving _problems/test-functions-240.R
Saving _problems/test-functions-249.R
Error in all_neigh_matrix[, z] : subscript out of bounds
cxr_pm_bootstrap ERROR : Cannot evaluate function at initial parameters
Error in all_neigh_matrix[, z] : subscript out of bounds
cxr_pm_bootstrap ERROR : Cannot evaluate function at initial parameters
Error in all_neigh_matrix[, z] : subscript out of bounds
cxr_pm_bootstrap ERROR : Cannot evaluate function at initial parameters
[ FAIL 52 | WARN 88 | SKIP 6 | PASS 115 ]
══ Skipped tests (6) ═══════════════════════════════════════════════════════════
• On CRAN (6): 'test-functions.R:254:3', 'test-functions.R:305:3',
'test-functions.R:357:3', 'test-functions.R:416:3',
'test-mct_functions.R:185:3', 'test-projections.R:152:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-functions.R:146:5'): parameter form 1 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:147:5'): parameter form 1 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:158:5'): parameter form 1 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:146:5'): parameter form 1 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:147:5'): parameter form 1 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:158:5'): parameter form 1 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:146:5'): parameter form 1 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:147:5'): parameter form 1 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:158:5'): parameter form 1 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:146:5'): parameter form 1 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:147:5'): parameter form 1 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:158:5'): parameter form 1 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:191:5'): parameter form 2 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:192:5'): parameter form 2 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:194:5'): parameter form 2 returns valid object ───
Expected `alpha_inter` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:203:5'): parameter form 2 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:191:5'): parameter form 2 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:192:5'): parameter form 2 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:194:5'): parameter form 2 returns valid object ───
Expected `alpha_inter` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:203:5'): parameter form 2 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:191:5'): parameter form 2 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:192:5'): parameter form 2 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:194:5'): parameter form 2 returns valid object ───
Expected `alpha_inter` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:203:5'): parameter form 2 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:191:5'): parameter form 2 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:192:5'): parameter form 2 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:194:5'): parameter form 2 returns valid object ───
Expected `alpha_inter` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:203:5'): parameter form 2 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:236:5'): parameter form 3 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:237:5'): parameter form 3 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:238:5'): parameter form 3 returns valid object ───
Expected `alpha_intra` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:239:5'): parameter form 3 returns valid object ───
Expected `alpha_inter` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:240:5'): parameter form 3 returns valid object ───
Expected `alpha_inter` to have length 16.
Actual length: 0.
── Failure ('test-functions.R:249:5'): parameter form 3 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:236:5'): parameter form 3 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:237:5'): parameter form 3 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:238:5'): parameter form 3 returns valid object ───
Expected `alpha_intra` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:239:5'): parameter form 3 returns valid object ───
Expected `alpha_inter` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:240:5'): parameter form 3 returns valid object ───
Expected `alpha_inter` to have length 16.
Actual length: 0.
── Failure ('test-functions.R:249:5'): parameter form 3 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:236:5'): parameter form 3 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:237:5'): parameter form 3 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:238:5'): parameter form 3 returns valid object ───
Expected `alpha_intra` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:239:5'): parameter form 3 returns valid object ───
Expected `alpha_inter` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:240:5'): parameter form 3 returns valid object ───
Expected `alpha_inter` to have length 16.
Actual length: 0.
── Failure ('test-functions.R:249:5'): parameter form 3 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:236:5'): parameter form 3 returns valid object ───
Expected `sp_fit` to be an S3 object.
Actual OO type: none.
── Failure ('test-functions.R:237:5'): parameter form 3 returns valid object ───
Expected `lambda` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:238:5'): parameter form 3 returns valid object ───
Expected `alpha_intra` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:239:5'): parameter form 3 returns valid object ───
Expected `alpha_inter` to have type "double".
Actual type: "NULL"
── Failure ('test-functions.R:240:5'): parameter form 3 returns valid object ───
Expected `alpha_inter` to have length 16.
Actual length: 0.
── Failure ('test-functions.R:249:5'): parameter form 3 returns valid object ───
Expected `log_likelihood` to have type "double".
Actual type: "NULL"
[ FAIL 52 | WARN 88 | SKIP 6 | PASS 115 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.1
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc