Last updated on 2025-12-06 00:48:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.1 | 3.80 | 210.22 | 214.02 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.1 | 2.98 | 91.13 | 94.11 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.1 | 11.00 | 325.92 | 336.92 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.1 | 10.00 | 332.07 | 342.07 | OK | |
| r-devel-windows-x86_64 | 1.0.1 | 7.00 | 201.00 | 208.00 | OK | |
| r-patched-linux-x86_64 | 1.0.1 | 3.72 | 201.86 | 205.58 | OK | |
| r-release-linux-x86_64 | 1.0.1 | 3.73 | 199.64 | 203.37 | OK | |
| r-release-macos-arm64 | 1.0.1 | OK | ||||
| r-release-macos-x86_64 | 1.0.1 | 6.00 | 161.00 | 167.00 | OK | |
| r-release-windows-x86_64 | 1.0.1 | 5.00 | 203.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.1 | OK | ||||
| r-oldrel-macos-x86_64 | 1.0.1 | 5.00 | 194.00 | 199.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.1 | 8.00 | 285.00 | 293.00 | OK |
Version: 1.0.1
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking:
'knitr', 'ggpubr', 'NPLStoolbox', 'parafac4microbiome', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.1
Check: examples
Result: ERROR
Running examples in ‘CMTFtoolbox-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ACMTFR_modelSelection
> ### Title: Model selection for ACMTFR
> ### Aliases: ACMTFR_modelSelection
>
> ### ** Examples
>
> set.seed(123)
>
> I = 10
> J = 5
> K = 3
> df = array(rnorm(I*J*K), c(I,J,K))
> df2 = array(rnorm(I*J*K), c(I,J,K))
> datasets = list(df, df2)
> modes = list(c(1,2,3), c(1,4,5))
> Y = as.matrix(rnorm(I))
>
> # A very small procedure is run to limit computational requirements
> result = ACMTFR_modelSelection(datasets,
+ modes,
+ Y,
+ pi=1.0,
+ maxNumComponents=2,
+ nstart=2,
+ cvFolds=2,
+ rel_tol=0.5,
+ abs_tol=0.5)
Error in loadNamespace(x) : there is no package called ‘ggpubr’
Calls: ACMTFR_modelSelection ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [60s/66s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(CMTFtoolbox)
>
> test_check("CMTFtoolbox")
Saving _problems/test-ACMTFR_modelSelection-13.R
Saving _problems/test-ACMTFR_modelSelection-28.R
Saving _problems/test-ACMTFR_modelSelection-43.R
Saving _problems/test-ACMTF_modelSelection-12.R
Saving _problems/test-ACMTF_modelSelection-26.R
[ FAIL 5 | WARN 0 | SKIP 5 | PASS 129 ]
══ Skipped tests (5) ═══════════════════════════════════════════════════════════
• On CRAN (5): 'test-ACMTFR_modelSelection.R:47:3',
'test-ACMTF_modelSelection.R:30:3', 'test-acmtf_opt.R:97:3',
'test-acmtfr_opt.R:101:3', 'test-cmtf_opt.R:136:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-ACMTFR_modelSelection.R:13:3'): the function works normally ──
Expected `ACMTFR_modelSelection(...)` not to throw any errors.
Actually got a <packageNotFoundError> with message:
there is no package called 'ggpubr'
── Failure ('test-ACMTFR_modelSelection.R:28:3'): the function works for the tensor-matrix case ──
Expected `ACMTFR_modelSelection(...)` not to throw any errors.
Actually got a <packageNotFoundError> with message:
there is no package called 'ggpubr'
── Failure ('test-ACMTFR_modelSelection.R:43:3'): the function works when jack-knifing ──
Expected `ACMTFR_modelSelection(...)` not to throw any errors.
Actually got a <packageNotFoundError> with message:
there is no package called 'ggpubr'
── Failure ('test-ACMTF_modelSelection.R:12:3'): the function works normally ───
Expected `ACMTF_modelSelection(...)` not to throw any errors.
Actually got a <packageNotFoundError> with message:
there is no package called 'ggpubr'
── Failure ('test-ACMTF_modelSelection.R:26:3'): the function works when jack-knifing ──
Expected `ACMTF_modelSelection(...)` not to throw any errors.
Actually got a <packageNotFoundError> with message:
there is no package called 'ggpubr'
[ FAIL 5 | WARN 0 | SKIP 5 | PASS 129 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.1
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc