| lvm4net-package | Latent Variable Models for Networks |
| boxroc | Boxplot and ROC Curves |
| goflsm | Goodness-of-Fit diagnostics for LSM model |
| lca | Latent Class Analysis |
| lift | Lift |
| lsjm | Latent Space Joint Model |
| lsm | Latent Space Model |
| lta | Latent Trait Analysis |
| lvm4net | Latent Variable Models for Networks |
| mlta | Mixture of Latent Trait Analyzers |
| plot.gofobj | Plot GoF object |
| plot.lsjm | Two dimensional plot of Latent Space Joint Model output |
| plot.lsm | Two dimensional plot of the Latent Space Model output |
| plotY | Plot the adjacency matrix of the network |
| PPIgen | PPI genetic interactions |
| PPInet | PPI genetic and physical interactions data |
| PPIphy | PPI physical interactions |
| print.gofobj | Print GoF object |
| rotXtoY | Rotate X to match Y |
| simulateLSM | Simulate from LSM model |