A Modular Platform for Reproducible Modeling of Species Niches
and Distributions
![[R logo]](../../../doc/html/Rlogo.svg)
![[Up]](../../../doc/html/left.jpg)
![[Top]](../../../doc/html/up.jpg)
Documentation for package ‘wallace’ version 2.0.5
Help Pages
| wallace-package | _Wallace_: A modular platform for reproducible ecological modeling |
| create_module | Create a Wallace module |
| ecoClimate_getdata | ecoClimate_getdata |
| ecoClimate_select | ecoClimate_select |
| envs_ecoClimate | envs_ecoClimate Obtain ecoClimate variables |
| envs_userEnvs | envs_userEnvs |
| envs_worldclim | envs_worldclim Obtain WorldClim variables |
| espace_nicheOv | espace_nicheOv Niche Overlap |
| espace_occDens | Occurrence density grid |
| espace_pca | espace_pca Principal component analysis |
| model_bioclim | model_bioclim Generate Bioclim model |
| model_maxent | model_maxent Generate maxent.jar or maxnet model |
| occs_paleoDb | 'occs_paleoDb' query paleobioDB database |
| occs_queryDb | occs_queryDb Query online database for species occurrence records. |
| occs_userOccs | occs_userOccs Loads user provided occurrence records |
| part_partitionOccs | part_partitionOccs Partition occurrence data |
| penvs_bgExtent | penvs_bgExtent Generate background extent |
| penvs_bgMask | penvs_bgMask Mask environmental data |
| penvs_bgSample | penvs_bgSample Sample background points |
| penvs_drawBgExtent | penvs_drawBgExtent: Draw background extent |
| penvs_userBgExtent | penvs_userBgExtent: user provided background extent |
| poccs_removeByID | poccs_removeByID Remove occurrence by ID |
| poccs_selectOccs | poccs_selectOccs Remove occurrences outside of polygon |
| poccs_thinOccs | poocs_thinOccs Thin occurrences |
| register_module | Register a Wallace module |
| run_wallace | Run _Wallace_ Application |
| vis_bioclimPlot | vis_bioclimPlot Visualize bivariate plot of BIOCLIM model |
| wallace | _Wallace_: A modular platform for reproducible ecological modeling |
| xfer_area | xfer_area Transfer model to a new area |
| xfer_draw | xfer_draw Draw extent of transfer |
| xfer_mess | xfer_mess generate MESS map for transferred raster |
| xfer_time | xfer_time Transfer model to a new time |
| xfer_userEnvs | xfer_userEnvs Transfer model to user specified area and time |
| xfer_userExtent | xfer_userExtent: user provided extent of transfer |