Approximate Bayesian Computations for Phylogenetic Comparative
Methods
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Documentation for package ‘pcmabc’ version 1.1.3
Help Pages
| pcmabc-package | Approximate Bayesian Computations for Phylogenetic Comparative Methods |
| draw_phylproc | Plots the trajectory of the stochastic process that evolved on the phylogeny. |
| get_phylogenetic_sample | Retrieve contemporary sample |
| pcmabc | Approximate Bayesian Computations for Phylogenetic Comparative Methods |
| PCM_ABC | ABC estimation for PCMs |
| simulate_phenotype_on_tree | Simulate a stochastic process on top of a phylogeny. |
| simulate_phylproc | Simultaneously simulate a phylogeny and a trait evolving on it. |
| simulate_sde_on_branch | Simulate a stochastic differential equation on a branch. using the 'yuima' |