Bayesian Network-Based Clustering of Multi-Omics Data
![[R logo]](../../../doc/html/Rlogo.svg)
![[Up]](../../../doc/html/left.jpg)
![[Top]](../../../doc/html/up.jpg)
Documentation for package ‘bnClustOmics’ version 1.1.1
Help Pages
| adjustMixedDir | Adjusting the PDAG matrix to model constraints This function can be used to adjust the adjacency matrix to model constraints, such as blacklist and background nodes |
| annotateEdges | Annotating edges from discovered networks |
| blInit | Initializing blacklist |
| blUpdate | Updating blacklist |
| bnclustNetworks | Deriving consensus networks based on posterior probabilities of mixture model |
| bnclustOmics | Bayesian network based clustering of multi-omics data |
| bnInfo | Constructing object of class bnInfo |
| bnres2 | bnres2 |
| bnres3 | bnres3 |
| bnres4 | bnres3 |
| checkmembership | Comparing estimated and ground truth membership |
| chooseK | Choosing the number of clusters |
| clustDBN | DBN-based clustering |
| clusters | Extracting cluster memberships |
| dags | Extracting edge posterior probabilities |
| getModels | Deriving consensus graphs |
| mappings | mappings |
| penInit | Initializing penalization matrix |
| penUpdateInter | Updating penalization matrix (between two omics types) |
| penUpdateIntra | Updating penalization matrix (intra one omics type) |
| plotNode | Plotting all connections of one node |
| posteriors | Extracting edge posterior probabilities |
| relabelSimulation | Relabeling clusters |
| simclusters | simclusters |
| simdags | simdags |
| simdata | simdata |
| simint | simint |
| stringint | stringint |
| toydata | toydata |