Compartmental Susceptible-Infectious-Recovered (SIR) Model of Community and Household Infection

Documentation for package ‘SIRmcmc’ version 1.1

community.attack.rate	Compute the community attack rate
hh.transmission	Simulated data under the SIR.
hh.transmission.epsilon	Simulated data under SIR, with covariates.
household.transmission	Estimate parameters from SIR model
MCMC.date	Convert dates to a list of extendend natural numbers.
prior	Compute prior probability of parameters
secondary.attack.rate	Compute the secondary attack rate
unifprior	A uniform prior on the model parameters