Download Content from NCBI Databases

---

Documentation for package ‘RISmed’ version 2.3.0

• DESCRIPTION file.
• Package NEWS.

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A C D E G H I K L M N P Q R S T V Y

RISmed-package

Download content from NCBI databases.

-- A --

AbstractText	Extracts 'AbstractText' from 'Medline' object.
AbstractText-method	~~ Methods for Function 'AbstractText' in Package 'RISmed' ~~
AbstractText-methods	~~ Methods for Function 'AbstractText' in Package 'RISmed' ~~
Affiliation	Extracts 'Affiliation' from 'Medline' object.
Affiliation-method	~~ Methods for Function 'Affiliation' in Package 'RISmed' ~~
Affiliation-methods	~~ Methods for Function 'Affiliation' in Package 'RISmed' ~~
ArticleId	Extracts 'ArticleId' from 'Medline' object.
ArticleId-method	~~ Methods for Function 'ArticleId' in Package 'RISmed' ~~
ArticleId-methods	~~ Methods for Function 'ArticleId' in Package 'RISmed' ~~
ArticleTitle	Extracts 'ArticleTitle' from 'Medline' object.
ArticleTitle-method	~~ Methods for Function 'ArticleTitle' in Package 'RISmed' ~~
ArticleTitle-methods	~~ Methods for Function 'ArticleTitle' in Package 'RISmed' ~~
Author	Extracts 'Author' from 'Medline' object.
Author-method	~~ Methods for Function 'Author' in Package 'RISmed' ~~
Author-methods	~~ Methods for Function 'Author' in Package 'RISmed' ~~

-- C --

c-method	Concatenate Medline
Citations	List of citing article titles where listed in PubMed.
Citations-method	~~ Methods for Function 'Citations' in Package 'RISmed' ~~
Citations-methods	~~ Methods for Function 'Citations' in Package 'RISmed' ~~
COIStatement	Extracts 'COIStatement' from 'Medline' object.
COIStatement-method	~~ Methods for Function 'COIStatement' in Package 'RISmed' ~~
COIStatement-methods	~~ Methods for Function 'COIStatement' in Package 'RISmed' ~~
CopyrightInformation	Extracts 'CopyrightInformation' from 'Medline' object.
CopyrightInformation-method	~~ Methods for Function 'CopyrightInformation' in Package 'RISmed' ~~
CopyrightInformation-methods	~~ Methods for Function 'CopyrightInformation' in Package 'RISmed' ~~
Country	Extracts 'Country' from 'Medline' object.
Country-method	~~ Methods for Function 'Country' in Package 'RISmed' ~~
Country-methods	~~ Methods for Function 'Country' in Package 'RISmed' ~~

-- D --

DayAccepted	Extracts 'DayAccepted' from 'Medline' object.
DayAccepted-method	~~ Methods for Function 'DayAccepted' in Package 'RISmed' ~~
DayAccepted-methods	~~ Methods for Function 'DayAccepted' in Package 'RISmed' ~~
DayArticleDate	Extracts 'DayArticleDate' from 'Medline' object.
DayArticleDate-method	~~ Methods for Function 'DayArticleDate' in Package 'RISmed' ~~
DayArticleDate-methods	~~ Methods for Function 'DayArticleDate' in Package 'RISmed' ~~
DayEntrez	Extracts 'DayEntrez' from 'Medline' object.
DayEntrez-method	~~ Methods for Function 'DayEntrez' in Package 'RISmed' ~~
DayEntrez-methods	~~ Methods for Function 'DayEntrez' in Package 'RISmed' ~~
DayEpublish	Extracts 'DayEpublish' from 'Medline' object.
DayEpublish-method	~~ Methods for Function 'DayEpublish' in Package 'RISmed' ~~
DayEpublish-methods	~~ Methods for Function 'DayEpublish' in Package 'RISmed' ~~
DayMedline	Extracts 'DayMedline' from 'Medline' object.
DayMedline-method	~~ Methods for Function 'DayMedline' in Package 'RISmed' ~~
DayMedline-methods	~~ Methods for Function 'DayMedline' in Package 'RISmed' ~~
DayPmc	Extracts 'DayPmc' from 'Medline' object.
DayPmc-method	~~ Methods for Function 'DayPmc' in Package 'RISmed' ~~
DayPmc-methods	~~ Methods for Function 'DayPmc' in Package 'RISmed' ~~
DayPpublish	Extracts 'DayPpublish' from 'Medline' object.
DayPpublish-method	~~ Methods for Function 'DayPpublish' in Package 'RISmed' ~~
DayPpublish-methods	~~ Methods for Function 'DayPpublish' in Package 'RISmed' ~~
DayPubDate	Extracts 'DayPubDate' from 'Medline' object.
DayPubDate-method	~~ Methods for Function 'DayPubDate' in Package 'RISmed' ~~
DayPubDate-methods	~~ Methods for Function 'DayPubDate' in Package 'RISmed' ~~
DayPubmed	Extracts 'DayPubmed' from 'Medline' object.
DayPubmed-method	~~ Methods for Function 'DayPubmed' in Package 'RISmed' ~~
DayPubmed-methods	~~ Methods for Function 'DayPubmed' in Package 'RISmed' ~~
DayReceived	Extracts 'DayReceived' from 'Medline' object.
DayReceived-method	~~ Methods for Function 'DayReceived' in Package 'RISmed' ~~
DayReceived-methods	~~ Methods for Function 'DayReceived' in Package 'RISmed' ~~
DayRevised	Extracts 'DayRevised' from 'Medline' object.
DayRevised-method	~~ Methods for Function 'DayRevised' in Package 'RISmed' ~~
DayRevised-methods	~~ Methods for Function 'DayRevised' in Package 'RISmed' ~~
DOI	Extracts 'DOI' from 'Medline' object.
DOI-method	~~ Methods for Function 'DOI' in Package 'RISmed' ~~
DOI-methods	~~ Methods for Function 'DOI' in Package 'RISmed' ~~

-- E --

ELocationID	Extracts 'ELocationID' from 'Medline' object.
ELocationID-method	~~ Methods for Function 'ELocationID' in Package 'RISmed' ~~
ELocationID-methods	~~ Methods for Function 'ELocationID' in Package 'RISmed' ~~
EUtilsGet	Results of an NCBI EUtils query
EUtilsQuery	Construct URL to make NCBI EUtils query
EUtilsQuery-class	Construct URL to make NCBI EUtils query
EUtilsSummary	Get summary of NCBI EUtils query
EUtilsSummary-class	Class '"EUtilsSummary"'

-- G --

GrantID	Extracts list of 'GrantID' info 'Medline' object including 'GrantID' and 'GrantAgency' where listed in PubMed.
GrantID-method	~~ Methods for Function 'GrantID' in Package 'RISmed' ~~
GrantID-methods	~~ Methods for Function 'GrantID' in Package 'RISmed' ~~

-- H --

HourAccepted	Extracts 'HourAccepted' from 'Medline' object.
HourAccepted-method	~~ Methods for Function 'HourAccepted' in Package 'RISmed' ~~
HourAccepted-methods	~~ Methods for Function 'HourAccepted' in Package 'RISmed' ~~
HourEntrez	Extracts 'HourEntrez' from 'Medline' object.
HourEntrez-method	~~ Methods for Function 'HourEntrez' in Package 'RISmed' ~~
HourEntrez-methods	~~ Methods for Function 'HourEntrez' in Package 'RISmed' ~~
HourEpublish	Extracts 'HourEpublish' from 'Medline' object.
HourEpublish-method	~~ Methods for Function 'HourEpublish' in Package 'RISmed' ~~
HourEpublish-methods	~~ Methods for Function 'HourEpublish' in Package 'RISmed' ~~
HourMedline	Extracts 'HourMedline' from 'Medline' object.
HourMedline-method	~~ Methods for Function 'HourMedline' in Package 'RISmed' ~~
HourMedline-methods	~~ Methods for Function 'HourMedline' in Package 'RISmed' ~~
HourPmc	Extracts 'HourPmc' from 'Medline' object.
HourPmc-method	~~ Methods for Function 'HourPmc' in Package 'RISmed' ~~
HourPmc-methods	~~ Methods for Function 'HourPmc' in Package 'RISmed' ~~
HourPpublish	Extracts 'HourPpublish' from 'Medline' object.
HourPpublish-method	~~ Methods for Function 'HourPpublish' in Package 'RISmed' ~~
HourPpublish-methods	~~ Methods for Function 'HourPpublish' in Package 'RISmed' ~~
HourPubmed	Extracts 'HourPubmed' from 'Medline' object.
HourPubmed-method	~~ Methods for Function 'HourPubmed' in Package 'RISmed' ~~
HourPubmed-methods	~~ Methods for Function 'HourPubmed' in Package 'RISmed' ~~
HourReceived	Extracts 'HourReceived' from 'Medline' object.
HourReceived-method	~~ Methods for Function 'HourReceived' in Package 'RISmed' ~~
HourReceived-methods	~~ Methods for Function 'HourReceived' in Package 'RISmed' ~~

-- I --

ISOAbbreviation	Extracts 'ISOAbbreviation' from 'Medline' object.
ISOAbbreviation-method	~~ Methods for Function 'ISOAbbreviation' in Package 'RISmed' ~~
ISOAbbreviation-methods	~~ Methods for Function 'ISOAbbreviation' in Package 'RISmed' ~~
ISSN	Extracts 'ISSN' from 'Medline' object.
ISSN-method	~~ Methods for Function 'ISSN' in Package 'RISmed' ~~
ISSN-methods	~~ Methods for Function 'ISSN' in Package 'RISmed' ~~
ISSNLinking	Extracts 'ISSNLinking' from 'Medline' object.
ISSNLinking-method	~~ Methods for Function 'ISSNLinking' in Package 'RISmed' ~~
ISSNLinking-methods	~~ Methods for Function 'ISSNLinking' in Package 'RISmed' ~~
Issue	Extracts 'Issue' from 'Medline' object.
Issue-method	~~ Methods for Function 'Issue' in Package 'RISmed' ~~
Issue-methods	~~ Methods for Function 'Issue' in Package 'RISmed' ~~

-- K --

Keywords	Extracts list of 'Keywords' info from 'Medline' object.
Keywords-method	~~ Methods for Function 'Keywords' in Package 'RISmed' ~~
Keywords-methods	~~ Methods for Function 'Keywords' in Package 'RISmed' ~~

-- L --

Language	Extracts 'Language' from 'Medline' object.
Language-method	~~ Methods for Function 'Language' in Package 'RISmed' ~~
Language-methods	~~ Methods for Function 'Language' in Package 'RISmed' ~~

-- M --

Medline	Class '"Medline"'
Medline-class	Class '"Medline"'
MedlinePgn	Extracts 'MedlinePgn' from 'Medline' object.
MedlinePgn-method	~~ Methods for Function 'MedlinePgn' in Package 'RISmed' ~~
MedlinePgn-methods	~~ Methods for Function 'MedlinePgn' in Package 'RISmed' ~~
MedlineTA	Extracts 'MedlineTA' from 'Medline' object.
MedlineTA-method	~~ Methods for Function 'MedlineTA' in Package 'RISmed' ~~
MedlineTA-methods	~~ Methods for Function 'MedlineTA' in Package 'RISmed' ~~
Mesh	Extracts 'Mesh' headings from 'Medline' object.
Mesh-method	~~ Methods for Function 'Mesh' in Package 'RISmed' ~~
Mesh-methods	~~ Methods for Function 'Mesh' in Package 'RISmed' ~~
MinuteAccepted	Extracts 'MinuteAccepted' from 'Medline' object.
MinuteAccepted-method	~~ Methods for Function 'MinuteAccepted' in Package 'RISmed' ~~
MinuteAccepted-methods	~~ Methods for Function 'MinuteAccepted' in Package 'RISmed' ~~
MinuteEntrez	Extracts 'MinuteEntrez' from 'Medline' object.
MinuteEntrez-method	~~ Methods for Function 'MinuteEntrez' in Package 'RISmed' ~~
MinuteEntrez-methods	~~ Methods for Function 'MinuteEntrez' in Package 'RISmed' ~~
MinuteEpublish	Extracts 'MinuteEpublish' from 'Medline' object.
MinuteEpublish-method	~~ Methods for Function 'MinuteEpublish' in Package 'RISmed' ~~
MinuteEpublish-methods	~~ Methods for Function 'MinuteEpublish' in Package 'RISmed' ~~
MinuteMedline	Extracts 'MinuteMedline' from 'Medline' object.
MinuteMedline-method	~~ Methods for Function 'MinuteMedline' in Package 'RISmed' ~~
MinuteMedline-methods	~~ Methods for Function 'MinuteMedline' in Package 'RISmed' ~~
MinutePmc	Extracts 'MinutePmc' from 'Medline' object.
MinutePmc-method	~~ Methods for Function 'MinutePmc' in Package 'RISmed' ~~
MinutePmc-methods	~~ Methods for Function 'MinutePmc' in Package 'RISmed' ~~
MinutePpublish	Extracts 'MinutePpublish' from 'Medline' object.
MinutePpublish-method	~~ Methods for Function 'MinutePpublish' in Package 'RISmed' ~~
MinutePpublish-methods	~~ Methods for Function 'MinutePpublish' in Package 'RISmed' ~~
MinutePubmed	Extracts 'MinutePubmed' from 'Medline' object.
MinutePubmed-method	~~ Methods for Function 'MinutePubmed' in Package 'RISmed' ~~
MinutePubmed-methods	~~ Methods for Function 'MinutePubmed' in Package 'RISmed' ~~
MinuteReceived	Extracts 'MinuteReceived' from 'Medline' object.
MinuteReceived-method	~~ Methods for Function 'MinuteReceived' in Package 'RISmed' ~~
MinuteReceived-methods	~~ Methods for Function 'MinuteReceived' in Package 'RISmed' ~~
MonthAccepted	Extracts 'MonthAccepted' from 'Medline' object.
MonthAccepted-method	~~ Methods for Function 'MonthAccepted' in Package 'RISmed' ~~
MonthAccepted-methods	~~ Methods for Function 'MonthAccepted' in Package 'RISmed' ~~
MonthArticleDate	Extracts 'MonthArticleDate' from 'Medline' object.
MonthArticleDate-method	~~ Methods for Function 'MonthArticleDate' in Package 'RISmed' ~~
MonthArticleDate-methods	~~ Methods for Function 'MonthArticleDate' in Package 'RISmed' ~~
MonthEntrez	Extracts 'MonthEntrez' from 'Medline' object.
MonthEntrez-method	~~ Methods for Function 'MonthEntrez' in Package 'RISmed' ~~
MonthEntrez-methods	~~ Methods for Function 'MonthEntrez' in Package 'RISmed' ~~
MonthEpublish	Extracts 'MonthEpublish' from 'Medline' object.
MonthEpublish-method	~~ Methods for Function 'MonthEpublish' in Package 'RISmed' ~~
MonthEpublish-methods	~~ Methods for Function 'MonthEpublish' in Package 'RISmed' ~~
MonthMedline	Extracts 'MonthMedline' from 'Medline' object.
MonthMedline-method	~~ Methods for Function 'MonthMedline' in Package 'RISmed' ~~
MonthMedline-methods	~~ Methods for Function 'MonthMedline' in Package 'RISmed' ~~
MonthPmc	Extracts 'MonthPmc' from 'Medline' object.
MonthPmc-method	~~ Methods for Function 'MonthPmc' in Package 'RISmed' ~~
MonthPmc-methods	~~ Methods for Function 'MonthPmc' in Package 'RISmed' ~~
MonthPpublish	Extracts 'MonthPpublish' from 'Medline' object.
MonthPpublish-method	~~ Methods for Function 'MonthPpublish' in Package 'RISmed' ~~
MonthPpublish-methods	~~ Methods for Function 'MonthPpublish' in Package 'RISmed' ~~
MonthPubDate	Extracts 'MonthPubDate' from 'Medline' object.
MonthPubDate-method	~~ Methods for Function 'MonthPubDate' in Package 'RISmed' ~~
MonthPubDate-methods	~~ Methods for Function 'MonthPubDate' in Package 'RISmed' ~~
MonthPubmed	Extracts 'MonthPubmed' from 'Medline' object.
MonthPubmed-method	~~ Methods for Function 'MonthPubmed' in Package 'RISmed' ~~
MonthPubmed-methods	~~ Methods for Function 'MonthPubmed' in Package 'RISmed' ~~
MonthReceived	Extracts 'MonthReceived' from 'Medline' object.
MonthReceived-method	~~ Methods for Function 'MonthReceived' in Package 'RISmed' ~~
MonthReceived-methods	~~ Methods for Function 'MonthReceived' in Package 'RISmed' ~~
MonthRevised	Extracts 'MonthRevised' from 'Medline' object.
MonthRevised-method	~~ Methods for Function 'MonthRevised' in Package 'RISmed' ~~
MonthRevised-methods	~~ Methods for Function 'MonthRevised' in Package 'RISmed' ~~
myeloma	Example of results from 'EUtilsGet'

-- N --

NlmUniqueID	Extracts 'NlmUniqueID' from 'Medline' object.
NlmUniqueID-method	~~ Methods for Function 'NlmUniqueID' in Package 'RISmed' ~~
NlmUniqueID-methods	~~ Methods for Function 'NlmUniqueID' in Package 'RISmed' ~~

-- P --

PMID	Extracts 'PMID' from 'Medline' object.
PMID-method	~~ Methods for Function 'PMID' in Package 'RISmed' ~~
PMID-methods	~~ Methods for Function 'PMID' in Package 'RISmed' ~~
print-method	Print method for Medline object
print-method	Print method for EUtilsSummary object
print-methods	Print method for EUtilsSummary object
PublicationStatus	Extracts 'PublicationStatus' from 'Medline' object.
PublicationStatus-method	~~ Methods for Function 'PublicationStatus' in Package 'RISmed' ~~
PublicationStatus-methods	~~ Methods for Function 'PublicationStatus' in Package 'RISmed' ~~
PublicationType	Extracts 'PublicationType' from 'Medline' object.
PublicationType-method	~~ Methods for Function 'PublicationType' in Package 'RISmed' ~~
PublicationType-methods	~~ Methods for Function 'PublicationType' in Package 'RISmed' ~~

-- Q --

Query	Extract 'Query' from 'Medline' object.
Query-method	~~ Methods for Function 'Query' in Package 'RISmed' ~~
Query-methods	~~ Methods for Function 'Query' in Package 'RISmed' ~~
QueryCount	Count of record results for EUtilsQuery
QueryCount-method	Count of record results for EUtilsQuery
QueryId	Get ids from EUtilsQuery
QueryId-method	Get ids from EUtilsQuery
QueryTranslation	Get the NCBI query translation from EUtilsQuery
QueryTranslation-method	Get the NCBI query translation from EUtilsQuery

-- R --

RISmed

Download content from NCBI databases.

-- S --

show-method	Show method for Medline object
show-method	Show method for EUtilsSummary object
show-methods	Show method for EUtilsSummary object
summary-method	Summary method for EUtilsSummary object
summary-methods	Summary method for EUtilsSummary object

-- T --

Title	Extracts 'Title' from 'Medline' object.
Title-method	~~ Methods for Function 'Title' in Package 'RISmed' ~~
Title-methods	~~ Methods for Function 'Title' in Package 'RISmed' ~~

-- V --

Volume	Extracts 'Volume' from 'Medline' object.
Volume-method	~~ Methods for Function 'Volume' in Package 'RISmed' ~~
Volume-methods	~~ Methods for Function 'Volume' in Package 'RISmed' ~~

-- Y --

YearAccepted	Extracts 'YearAccepted' from 'Medline' object.
YearAccepted-method	~~ Methods for Function 'YearAccepted' in Package 'RISmed' ~~
YearAccepted-methods	~~ Methods for Function 'YearAccepted' in Package 'RISmed' ~~
YearArticleDate	Extracts 'YearArticleDate' from 'Medline' object.
YearArticleDate-method	~~ Methods for Function 'YearArticleDate' in Package 'RISmed' ~~
YearArticleDate-methods	~~ Methods for Function 'YearArticleDate' in Package 'RISmed' ~~
YearEntrez	Extracts 'YearEntrez' from 'Medline' object.
YearEntrez-method	~~ Methods for Function 'YearEntrez' in Package 'RISmed' ~~
YearEntrez-methods	~~ Methods for Function 'YearEntrez' in Package 'RISmed' ~~
YearEpublish	Extracts 'YearEpublish' from 'Medline' object.
YearEpublish-method	~~ Methods for Function 'YearEpublish' in Package 'RISmed' ~~
YearEpublish-methods	~~ Methods for Function 'YearEpublish' in Package 'RISmed' ~~
YearMedline	Extracts 'YearMedline' from 'Medline' object.
YearMedline-method	~~ Methods for Function 'YearMedline' in Package 'RISmed' ~~
YearMedline-methods	~~ Methods for Function 'YearMedline' in Package 'RISmed' ~~
YearPmc	Extracts 'YearPmc' from 'Medline' object.
YearPmc-method	~~ Methods for Function 'YearPmc' in Package 'RISmed' ~~
YearPmc-methods	~~ Methods for Function 'YearPmc' in Package 'RISmed' ~~
YearPpublish	Extracts 'YearPpublish' from 'Medline' object.
YearPpublish-method	~~ Methods for Function 'YearPpublish' in Package 'RISmed' ~~
YearPpublish-methods	~~ Methods for Function 'YearPpublish' in Package 'RISmed' ~~
YearPubDate	Extracts 'YearPubDate' from 'Medline' object.
YearPubDate-method	~~ Methods for Function 'YearPubDate' in Package 'RISmed' ~~
YearPubDate-methods	~~ Methods for Function 'YearPubDate' in Package 'RISmed' ~~
YearPubmed	Extracts 'YearPubmed' from 'Medline' object.
YearPubmed-method	~~ Methods for Function 'YearPubmed' in Package 'RISmed' ~~
YearPubmed-methods	~~ Methods for Function 'YearPubmed' in Package 'RISmed' ~~
YearReceived	Extracts 'YearReceived' from 'Medline' object.
YearReceived-method	~~ Methods for Function 'YearReceived' in Package 'RISmed' ~~
YearReceived-methods	~~ Methods for Function 'YearReceived' in Package 'RISmed' ~~
YearRevised	Extracts 'YearRevised' from 'Medline' object.
YearRevised-method	~~ Methods for Function 'YearRevised' in Package 'RISmed' ~~
YearRevised-methods	~~ Methods for Function 'YearRevised' in Package 'RISmed' ~~