Estimate Structured Additive Regression Models with 'BayesX'
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Documentation for package ‘R2BayesX’ version 1.1-3
- DESCRIPTION file.
- Code demos. Use demo() to run them.
Help Pages
| R2BayesX-package | Estimate STAR Models with BayesX |
| r2bayesx-package | Estimate STAR Models with BayesX |
| add.neighbor | Add Neighborhood Relations |
| bayesx | Estimate STAR Models with BayesX |
| bayesx.construct | Construct BayesX Model Term Objects |
| bayesx.construct.bl.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.factor.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.gk.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.gs.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.kr.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.lasso.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.mrf.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.nigmix.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.ps.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.ra.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.re.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.ridge.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.rw1.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.rw2.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.season.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.te.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.construct.tensor.smooth.construct | Construct BayesX Model Term Objects |
| bayesx.control | Control Parameters for BayesX |
| bayesx.term.options | Show BayesX Term Options |
| bayesx_logfile | BayesX Log-Files |
| bayesx_prgfile | BayesX Program-Files |
| bayesx_runtime | BayesX Program-Runtimes |
| BeechBnd | Beech Location Map |
| BeechGra | Beech Neighborhood Information |
| bnd2gra | Convert Boundary Format to Graph Format |
| bnd2sp | Convert sp and bnd format into each other |
| bxopts | Show BayesX Term Options |
| colorlegend | Plot a Color Legend |
| cprob | Extract Contour Probabilities |
| delete.neighbor | Delete Neighborhood Relations |
| DIC | Deviance Information Criterion |
| DIC.bayesx | Deviance Information Criterion |
| drawmap | Plot Maps |
| FantasyBnd | Fantasy Map |
| fitted.bayesx | Extract BayesX Fitted Values and Residuals |
| forest | Forest Health Data |
| ForestHealth | Forest Health Data |
| GAMart | GAM Artificial Data Set |
| gamart | GAM Artificial Data Set |
| GCV | Gerneralized Cross Validation Criterion |
| GCV.bayesx | Gerneralized Cross Validation Criterion |
| GermanyBnd | Germany Map |
| get.neighbor | Obtain Neighbors of Given Regions |
| getscript | Generate an executable R fitted model script |
| gra2nb | Convert nb and gra format into each other |
| GRstats | Compute Gelman and Rubin's convergence diagnostics from multicore BayesX models. |
| logfile | BayesX Log-Files |
| MunichBnd | Munich Map |
| nb2gra | Convert nb and gra format into each other |
| parse.bayesx.input | Parse BayesX Input |
| plot.bayesx | Default BayesX Plotting |
| plot.bnd | Plot Maps |
| plot2d | 2D Effect Plot |
| plot3d | 3D Effect Plot |
| plotblock | Factor Variable and Random Effects Plots |
| plotmap | Plot Maps |
| plotnonp | 2D Effect Plot |
| plotsamples | Plot Sampling Path(s) of Coefficient(s) and Variance(s) |
| plotsurf | 3D Effect Plot |
| predict.bayesx | Prediction from fitted BayesX objects |
| prgfile | BayesX Program-Files |
| R2BayesX | Estimate STAR Models with BayesX |
| r2bayesx | Estimate STAR Models with BayesX |
| read.bayesx.output | Read BayesX Output from Directories |
| read.bnd | Read Geographical Information in Boundary Format |
| read.gra | Read Geographical Information in Graph Format |
| residuals.bayesx | Extract BayesX Fitted Values and Residuals |
| runtime | BayesX Program-Runtimes |
| samples | Extract Samples of Coefficients and Variances |
| shp2bnd | convert a shape-file into a boundary object |
| sliceplot | Plot Slices of Bivariate Functions |
| sp2bnd | Convert sp and bnd format into each other |
| summary.bayesx | Bayesx Summary Statistics |
| sx | Construct BayesX Model Terms in A Formula |
| term.freqs | Extract model term selection frequencies. |
| write.bayesx.input | Write the BayesX Program |
| write.bnd | Saving Maps in Boundary Format |
| write.gra | Saving Maps in Graph Format |
| zambia | Determinants of Childhood Malnutrition in Zambia |
| ZambiaBnd | Zambia Map |
| ZambiaNutrition | Determinants of Childhood Malnutrition in Zambia |