| Mangrove-package | Mangrove: Risk prediction on trees |
| addPed | The MangroveTree class |
| applyBetas | The MangroveContPreds class |
| applyORs | The MangroveRiskPreds class |
| calcBetas | The MangroveContPreds class |
| calcORs | The MangroveRiskPreds class |
| ccped | Example data for the Mangrove vignette |
| contped | Example data for the Mangrove vignette |
| exampleBetas | Example data for the Mangrove vignette |
| exampleORs | Example data for the Mangrove vignette |
| famped | Example data for the Mangrove vignette |
| getPrevs | The MangroveTree class |
| getVarExp | Calculating liability-scale variance explained by genetic risk variants |
| getVarExpSim | Calculating liability-scale variance explained by genetic risk variants |
| initialiseTree | The MangroveTree class |
| Mangrove | Mangrove: Risk prediction on trees |
| MangroveBetas | The MangroveBetas class |
| MangroveContPreds | The MangroveContPreds class |
| MangroveExamples | Example data for the Mangrove vignette |
| MangroveORs | The MangroveORs class |
| MangrovePed | The MangrovePed class |
| MangroveRiskPreds | The MangroveRiskPreds class |
| MangroveSample | The MangroveSample class |
| MangroveTree | The MangroveTree class |
| plot.MangroveBetas | The MangroveBetas class |
| plot.MangroveContPreds | The MangroveContPreds class |
| plot.MangroveORs | The MangroveORs class |
| plot.MangrovePed | The MangrovePed class |
| plot.MangroveRiskPreds | The MangroveRiskPreds class |
| plot.MangroveSample | The MangroveSample class |
| plot.MangroveTree | The MangroveTree class |
| plotNaivePrev | Plotting expected |
| plotSampledPrev | Plotting expected |
| print.MangroveBetas | The MangroveBetas class |
| print.MangroveContPreds | The MangroveContPreds class |
| print.MangroveORs | The MangroveORs class |
| print.MangrovePed | The MangrovePed class |
| print.MangroveRiskPreds | The MangroveRiskPreds class |
| print.MangroveSample | The MangroveSample class |
| print.MangroveTree | The MangroveTree class |
| readBetas | The MangroveBetas class |
| readORs | The MangroveORs class |
| readPed | The MangrovePed class |
| summary.MangroveBetas | The MangroveBetas class |
| summary.MangroveContPreds | The MangroveContPreds class |
| summary.MangroveORs | The MangroveORs class |
| summary.MangrovePed | The MangrovePed class |
| summary.MangroveRiskPreds | The MangroveRiskPreds class |
| summary.MangroveSample | The MangroveSample class |
| summary.MangroveTree | The MangroveTree class |