Package: corrcoverage
Type: Package
Title: Correcting the Coverage of Credible Sets from Bayesian Genetic
        Fine Mapping
Version: 1.2.1
Authors@R: c(
        person("Anna", "Hutchinson", role = c("aut", "cre"), email = "anna.hutchinson@mrc-bsu.cam.ac.uk"),
        person("Chris", "Wallace", role = c("aut")),
        person("Kevin", "Kunzmann", role = c("ctb"))
    )
Maintainer: Anna Hutchinson <anna.hutchinson@mrc-bsu.cam.ac.uk>
Description: Using a computationally efficient method, the package can
    be used to find the corrected coverage estimate of a credible set 
    of putative causal variants from Bayesian genetic fine-mapping. 
    The package can also be used to obtain a corrected credible set
    if required; that is, the smallest set of variants required such 
    that the corrected coverage estimate of the resultant credible set is  
    within some user defined accuracy of the desired coverage.
    Maller et al. (2012) <doi:10.1038/ng.2435>,
    Wakefield (2009) <doi:10.1002/gepi.20359>,
    Fortune and Wallace (2018) <doi:10.1093/bioinformatics/bty898>.
URL: https://annahutch.github.io/corrcoverage
License: MIT + file LICENSE
BugReports: https://github.com/annahutch/corrcoverage/issues
OS_type: unix
Encoding: UTF-8
LazyData: true
Suggests: covr, dplyr, knitr, mvtnorm, rmarkdown, testthat, pkgdown
VignetteBuilder: knitr
RoxygenNote: 7.0.2
LinkingTo: Rcpp, RcppArmadillo
Imports: data.table, magrittr, stats, matrixStats, Rcpp
SystemRequirements: C++11
NeedsCompilation: yes
Packaged: 2019-12-06 17:56:15 UTC; anna
Author: Anna Hutchinson [aut, cre],
  Chris Wallace [aut],
  Kevin Kunzmann [ctb]
Depends: R (>= 3.5.0)
Repository: CRAN
Date/Publication: 2019-12-06 23:20:12 UTC
Built: R 4.4.0; x86_64-apple-darwin20; 2024-04-07 23:16:47 UTC; unix
Archs: corrcoverage.so.dSYM
